Evidence map›Paper›PMID 30018874›Full record

ArticleIMA fungus2018

NGS barcode sequencing in taxonomy and diagnostics, an application in "

Claudia Colabella, Laura Corte, Luca Roscini, Matteo Bassetti, Carlo Tascini, Joseph C Mellor, Wieland Meyer, Vincent Robert, Duong Vu, Gianluigi Cardinali

Open access · goldAbstract read
In one paragraph

Article in IMA fungus, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. LAMP-Based Detection ofThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. DNA barcoding of phytopathogens for disease diagnostics and bio-surveillance.World journal of microbiology & biotechnology · 2021
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Early Ongoing Speciation ofFrontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

Claudia ColabellaMicrobiology Section, Department of Pharmaceutical Sciences, University of Perugia, 06121, Italy.
Laura CorteMicrobiology Section, Department of Pharmaceutical Sciences, University of Perugia, 06121, Italy.
Luca RosciniMicrobiology Section, Department of Pharmaceutical Sciences, University of Perugia, 06121, Italy.
Matteo BassettiInfectious Diseases Division, Santa Maria Misericordia University Hospital, Udine, 33100, Italy.
Carlo TasciniInfectious Diseases Division, Cotugno Hospital Napoli, 80131, Italy.
Joseph C MellorseqWell Inc., 376 Hale Street, Beverly, MA 01915, USA.
Wieland MeyerMolecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Sydney Medical School, Westmead Hospital, Marie Bashir Institute for Infectious Diseases and Biosecurity, The University of Sydney, Westmead Institute for Medical Research, Sydney, NSW 2006, Australia.
Vincent RobertBioinformatics Unit, Westerdijk Fungal Biodiversity Institute, 3508 CT, Utrecht, Netherlands.
Duong VuBioinformatics Unit, Westerdijk Fungal Biodiversity Institute, 3508 CT, Utrecht, Netherlands.
Gianluigi CardinaliMicrobiology Section, Department of Pharmaceutical Sciences, University of Perugia, 06121, Italy.
University of Perugia · ITWesterdijk Fungal Biodiversity Institute · NLBeverly Hospital · USOspedale D. Cotugno · ITOspedale Santa Maria della Misericordia di Udine · ITWestmead Institute for Medical Research · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Species identification of yeasts and other Fungi is currently carried out with Sanger sequences of selected molecular markers, mainly from the ribosomal DNA operon, characterized by hundreds of tandem repeats of the 18S, ITS1, 5.8S, ITS2 and LSU

Indexed as

identificationITSLSUNext generation sequencingSanger

Identifiers

PMID30018874
PMCPMC6048569
OpenAlexW2804148470

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.