Evidence map›Paper›PMID 30018455›Full record

ArticleScientific reports2018

Development of nsP2 protease based cell free high throughput screening assay for evaluation of inhibitors against emerging Chikungunya virus.

Amrita Saha, Badri Narayan Acharya, Raj Priya, Nagesh K Tripathi, Ambuj Shrivastava, M Kameswara Rao, Pooja Kesari, Manju Narwal, Shailly Tomar, Sameer S Bhagyawant and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

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  9. Review
  10. A robust fluorogenic substrate for chikungunya virus protease (nsP2) activity.Protein science : a publication of the Protein Society · 2025
    Article
  11. Article
  12. Identification of a cell-active chikungunya virus nsP2 protease inhibitor using a covalent fragment-based screening approach.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Amrita SahaVirology Division, Defence Research & Development Establishment, Gwalior, 474002, India.
Badri Narayan AcharyaSynthetic Chemistry Division, Defence Research & Development Establishment, Gwalior, 474002, India.
Raj PriyaVirology Division, Defence Research & Development Establishment, Gwalior, 474002, India.
Nagesh K TripathiBioprocess Technology Division, Defence Research & Development Establishment, Gwalior, 474002, India.ORCID 0000-0003-3533-3262
Ambuj ShrivastavaVirology Division, Defence Research & Development Establishment, Gwalior, 474002, India.
M Kameswara RaoPharmacology & Toxicology Division, Defence Research & Development Establishment, Gwalior, 474002, India.
Pooja KesariDepartment of Biotechnology, Indian Institute of Technology Roorkee, Roorkee, 247667, India.
Manju NarwalDepartment of Biotechnology, Indian Institute of Technology Roorkee, Roorkee, 247667, India.
Shailly TomarDepartment of Biotechnology, Indian Institute of Technology Roorkee, Roorkee, 247667, India.
Sameer S BhagyawantSchool of Studies in Biotechnology, Jiwaji University, Gwalior, India.
Manmohan ParidaVirology Division, Defence Research & Development Establishment, Gwalior, 474002, India.
Paban Kumar DashVirology Division, Defence Research & Development Establishment, Gwalior, 474002, India. pabandash@drde.drdo.in.ORCID 0000-0003-4322-2044
Defence Research and Development Establishment · INIndian Institute of Technology Roorkee · INJiwaji University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chikungunya virus has emerged as one of the most important global arboviral threats over the last decade. Inspite of large scale morbidity, with long lasting polyarthralgia, so far no licensed vaccine or antiviral is available. CHIKV nsP2 protease is crucial for processing of viral nonstructural polypeptide precursor to release enzymes required for viral replication, thus making it a promising drug target. In this study, high cell density cultivation (HCDC) of Escherichia coli in batch process was carried out to produce rCHIKV nsP2pro in a cost-effective manner. The purified nsP2pro and fluorogenic peptide substrate have been adapted for fluorescence resonance energy transfer (FRET) based high throughput screening (HTS) assay with Z' value and CV of 0.67 ± 0.054 and <10% respectively. We used this cell free HTS system to screen panel of metal ions and its conjugate which revealed zinc acetate as a potential candidate, which was further found to inhibit CHIKV in Vero cells. Scale-up process has not been previously reported for any of the arboviral nonstructural enzymes. The successful scale-up method for viral protease together with a HTS assay could lead to the development of industrial level large-scale screening platform for identification of protease inhibitors against emerging and re-emerging viruses.

Indexed as

AnimalsAntiviral AgentsChikungunya virusChlorocebus aethiopsCysteine EndopeptidasesEscherichia coliFluorescence Resonance Energy TransferHigh-Throughput Screening AssaysProtease InhibitorsRecombinant ProteinsSubstrate SpecificityVero CellsVirus ReplicationZinc AcetateAntiviral AgentsCysteine EndopeptidasesnsP2 proteinaseProtease InhibitorsRecombinant ProteinsZinc Acetate

Identifiers

PMID30018455
PMCPMC6050329
OpenAlexW2857483486

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.