Evidence map›Paper›PMID 30018084›Full record

ArticleG3 (Bethesda, Md.)2018

Rapid Low-Cost Assembly of the

Edwin A Solares, Mahul Chakraborty, Danny E Miller, Shannon Kalsow, Kate Hall, Anoja G Perera, J J Emerson, R Scott Hawley

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 106 citations in OpenAlex.

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4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Edwin A SolaresDepartment of Ecology and Evolutionary Biology, University of California Irvine, CA.ORCID 0000-0002-3220-4927
Mahul ChakrabortyDepartment of Ecology and Evolutionary Biology, University of California Irvine, CA.ORCID 0000-0003-2414-9187
Danny E MillerStowers Institute for Medical Research, Kansas City, MO.ORCID 0000-0001-6096-8601
Shannon KalsowDepartment of Ecology and Evolutionary Biology, University of California Irvine, CA.
Kate HallStowers Institute for Medical Research, Kansas City, MO.
Anoja G PereraStowers Institute for Medical Research, Kansas City, MO.
J J EmersonDepartment of Ecology and Evolutionary Biology, University of California Irvine, CA jje@uci.edu rsh@stowers.org.ORCID 0000-0001-9474-0891
R Scott HawleyStowers Institute for Medical Research, Kansas City, MO jje@uci.edu rsh@stowers.org.ORCID 0000-0002-6478-0494
University of California, Irvine · USStowers Institute for Medical Research · USUniversity of Kansas Medical Center · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Christine Hui · 1994 to 2026
$57.9M
A resource for the genetic analysis of complex traitsR01RR024862 · NCRR · UNIVERSITY OF KANSAS LAWRENCE · PI MACDONALD, STUART JOHN · 2008 to 2011
$2.5M
Structural variation population size and the evolution of genome complexityR01GM123303 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI EMERSON, JAMES JORDAN · 2017 to 2021
$1.5M
PacBio RS Single Molecule, Real-Time (SMRT) DNA SequencerS10OD010794 · OD · UNIVERSITY OF CALIFORNIA-IRVINE · PI SANDMEYER, SUZANNE · 2012 to 2012
$600k
High-Throughput DNA SequencerS10OD021718 · OD · UNIVERSITY OF CALIFORNIA-IRVINE · PI SANDMEYER, SUZANNE · 2016 to 2016
$600k
High Throughput DNA SequencerS10RR025496 · NCRR · UNIVERSITY OF CALIFORNIA-IRVINE · PI SANDMEYER, SUZANNE · 2009 to 2009
$500k
NCI NIH HHS P30 CA062203NCRR NIH HHS R01 RR024862NCRR NIH HHS S10 RR025496NIGMS NIH HHS R01 GM123303NIH HHS S10 OD010794NIH HHS S10 OD021718
6 · The paper itself

Abstract

Accurate and comprehensive characterization of genetic variation is essential for deciphering the genetic basis of diseases and other phenotypes. A vast amount of genetic variation stems from large-scale sequence changes arising from the duplication, deletion, inversion, and translocation of sequences. In the past 10 years, high-throughput short reads have greatly expanded our ability to assay sequence variation due to single nucleotide polymorphisms. However, a recent

Indexed as

Computational BiologyGenome, InsectGenomicsAnimalsDrosophila melanogasterGene LibraryGenetic VariationGenome, MitochondrialHigh-Throughput Nucleotide SequencingMolecular Sequence AnnotationSequence Analysis, DNADrosophilagenome assemblynanopore sequencing

Identifiers

PMID30018084
PMCPMC6169397
OpenAlexW2795731640

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.