Evidence map›Paper›PMID 30018062›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Stem cell-derived clade F AAVs mediate high-efficiency homologous recombination-based genome editing.

Laura J Smith, Jason Wright, Gabriella Clark, Taihra Ul-Hasan, Xiangyang Jin, Abigail Fong, Manasa Chandra, Thia St Martin, Hillard Rubin, David Knowlton and 4 more

Erratum issuedAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
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  6. Article
  7. Review
  8. Article
  9. Durability of transgene expression after rAAV gene therapy.Molecular therapy : the journal of the American Society of Gene Therapy · 2022
    Review
  10. Understanding and overcoming adverse consequences of genome editing on hematopoietic stem and progenitor cells.Molecular therapy : the journal of the American Society of Gene Therapy · 2021
    Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Reply to "Efficient Nuclease-free HR by Clade F AAV Requires High MOIs with High Quality Vectors".Molecular therapy : the journal of the American Society of Gene Therapy · 2019
    Article
  20. Efficient Nuclease-free HR by Clade F AAV Requires High MOIs with High Quality Vectors.Molecular therapy : the journal of the American Society of Gene Therapy · 2019
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Laura J SmithDepartment of Surgery, Beckman Research Institute, City of Hope Medical Center, Duarte, CA 91010.
Jason WrightHomology Medicines, Inc., Bedford, MA 01730.
Gabriella ClarkDepartment of Surgery, Beckman Research Institute, City of Hope Medical Center, Duarte, CA 91010.
Taihra Ul-HasanDepartment of Surgery, Beckman Research Institute, City of Hope Medical Center, Duarte, CA 91010.
Xiangyang JinDepartment of Surgery, Beckman Research Institute, City of Hope Medical Center, Duarte, CA 91010.
Abigail FongDepartment of Surgery, Beckman Research Institute, City of Hope Medical Center, Duarte, CA 91010.
Manasa ChandraDepartment of Surgery, Beckman Research Institute, City of Hope Medical Center, Duarte, CA 91010.
Thia St MartinHomology Medicines, Inc., Bedford, MA 01730.
Hillard RubinHomology Medicines, Inc., Bedford, MA 01730.
David KnowltonHomology Medicines, Inc., Bedford, MA 01730.
Jeff L EllsworthHomology Medicines, Inc., Bedford, MA 01730.
Yuman FongDepartment of Surgery, Beckman Research Institute, City of Hope Medical Center, Duarte, CA 91010.
Kamehameha K WongDepartment of Hematology and Stem Cell Transplantation, City of Hope Medical Center, Duarte, CA 91010.
Saswati ChatterjeeDepartment of Surgery, Beckman Research Institute, City of Hope Medical Center, Duarte, CA 91010; schatterjee@coh.org.
City Of Hope National Medical Center · US

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI STANLEY R. HAMILTON · 1985 to 2026
$86.3M
Genetic Modification of Human Hematopoietic Stem Cells with Pseudotyped rAAVR01HL087285 · NHLBI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI CHATTERJEE, SASWATI · 2008 to 2011
$1.7M
NCI NIH HHS P30 CA033572NHLBI NIH HHS R01 HL087285
6 · The paper itself

Abstract

The precise correction of genetic mutations at the nucleotide level is an attractive permanent therapeutic strategy for human disease. However, despite significant progress, challenges to efficient and accurate genome editing persist. Here, we report a genome editing platform based upon a class of hematopoietic stem cell (HSC)-derived clade F adeno-associated virus (AAV), which does not require prior nuclease-mediated DNA breaks and functions exclusively through BRCA2-dependent homologous recombination. Genome editing is guided by complementary homology arms and is highly accurate and seamless, with no evidence of on-target mutations, including insertion/deletions or inclusion of AAV inverted terminal repeats. Efficient genome editing was demonstrated at different loci within the human genome, including a safe harbor locus, AAVS1, and the therapeutically relevant IL2RG gene, and at the murine Rosa26 locus. HSC-derived AAV vector (AAVHSC)-mediated genome editing was robust in primary human cells, including CD34

Indexed as

Gene EditingHomologous RecombinationBRCA2 ProteinDependovirusGenetic VectorsHematopoietic Stem CellsHumansInterleukin Receptor Common gamma SubunitK562 CellsBRCA2 ProteinBRCA2 protein, humanIL2RG protein, humanInterleukin Receptor Common gamma Subunitadeno-associated virusgenome editinghematopoietic stem cellshomologous recombinationin vivo genome editing

Identifiers

PMID30018062
PMCPMC6077703
OpenAlexW2884783182

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.