Evidence map›Paper›PMID 30016951›Full record

ArticleBMC systems biology2018

A quantitative systems pharmacology (QSP) model for Pneumocystis treatment in mice.

Guan-Sheng Liu, Richard Ballweg, Alan Ashbaugh, Yin Zhang, Joseph Facciolo, Melanie T Cushion, Tongli Zhang

Erratum issuedOpen access · diamondAbstract read
In one paragraph

Article in BMC systems biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. GEODE: anFrontiers in pharmacology · 2025
    Article
  3. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Guan-Sheng LiuDepartment of Pharmacology and Systems Physiology, College of Medicine, University of Cincinnati, 231 Albert Sabin Way, Cincinnati, OH, 45267-0576, USA.
Richard BallwegDepartment of Pharmacology and Systems Physiology, College of Medicine, University of Cincinnati, 231 Albert Sabin Way, Cincinnati, OH, 45267-0576, USA.
Alan AshbaughDepartment of Internal Medicine, College of Medicine, University of Cincinnati, Cincinnati, OH, USA.
Yin ZhangDivision of Biostatistics and Epidemiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Joseph FaccioloDepartment of Pharmacology and Systems Physiology, College of Medicine, University of Cincinnati, 231 Albert Sabin Way, Cincinnati, OH, 45267-0576, USA.
Melanie T CushionDepartment of Internal Medicine, College of Medicine, University of Cincinnati, Cincinnati, OH, USA.
Tongli ZhangDepartment of Pharmacology and Systems Physiology, College of Medicine, University of Cincinnati, 231 Albert Sabin Way, Cincinnati, OH, 45267-0576, USA. zhangtl@ucmail.uc.edu.ORCID http://orcid.org/0000-0003-1773-6279
Sabin Vaccine Institute · USUniversity of Cincinnati Medical Center · USCincinnati Children's Hospital Medical Center · USUniversity of Cincinnati · US

Funding

Immunopathology of the Pneumocystis Life Cycle StagesI01BX000523 · VA · CINCINNATI VA MEDICAL CENTER RESEARCH · PI CUSHION, MELANIE T · 2011 to 2014
–
BLRD VA I01 BX000523BLRD VA I01 BX004441BLRD VA IK6 BX005232
6 · The paper itself

Abstract

backgroundThe yeast-like fungi Pneumocystis, resides in lung alveoli and can cause a lethal infection known as Pneumocystis pneumonia (PCP) in hosts with impaired immune systems. Current therapies for PCP, such as trimethoprim-sulfamethoxazole (TMP-SMX), suffer from significant treatment failures and a multitude of serious side effects. Novel therapeutic approaches (i.e. newly developed drugs or novel combinations of available drugs) are needed to treat this potentially lethal opportunistic infection. Quantitative Systems Pharmacological (QSP) models promise to aid in the development of novel therapies by integrating available pharmacokinetic (PK) and pharmacodynamic (PD) knowledge to predict the effects of new treatment regimens.

resultsIn this work, we constructed and independently validated PK modules of a number of drugs with available pharmacokinetic data. Characterized by simple structures and well constrained parameters, these PK modules could serve as a convenient tool to summarize and predict pharmacokinetic profiles. With the currently accepted hypotheses on the life stages of Pneumocystis, we also constructed a PD module to describe the proliferation, transformation, and death of Pneumocystis. By integrating the PK module and the PD module, the QSP model was constrained with observed levels of asci and trophic forms following treatments with multiple drugs. Furthermore, the temporal dynamics of the QSP model were validated with corresponding data.

conclusionsWe developed and validated a QSP model that integrates available data and promises to facilitate the design of future therapies against PCP.

Indexed as

Models, BiologicalAnimalsAntifungal AgentsMicePneumocystisTissue DistributionAntifungal AgentsInfectious diseasePneumocystis - systems biology - quantitative systems pharmacology

Identifiers

PMID30016951
PMCPMC6050661
OpenAlexW2883499473

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.