Evidence map›Paper›PMID 30015123›Full record

ArticleThe Science of the total environment2018

Capturing the applicability of in vitro-in silico membrane transporter data in chemical risk assessment and biomedical research.

Laure-Alix Clerbaux, Sandra Coecke, Annie Lumen, Tomas Kliment, Andrew P Worth, Alicia Paini

Open access · hybridAbstract read
In one paragraph

Article in The Science of the total environment, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Molecular and cellular physiology of organic cation transporter 2.American journal of physiology. Renal physiology · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Laure-Alix ClerbauxEuropean Commission, Joint Research Centre, Via E. Fermi 2749, 21027 Ispra, Italy. Electronic address: laure.alix.clerbaux@gmail.com.
Sandra CoeckeEuropean Commission, Joint Research Centre, Via E. Fermi 2749, 21027 Ispra, Italy.
Annie LumenNational Center for Toxicological Research, US Food and Drug Administration (FDA), Jefferson, AR, USA.
Tomas KlimentKlimeto, Juzna 4, Roznava, Slovakia.
Andrew P WorthEuropean Commission, Joint Research Centre, Via E. Fermi 2749, 21027 Ispra, Italy.
Alicia PainiEuropean Commission, Joint Research Centre, Via E. Fermi 2749, 21027 Ispra, Italy.
Joint Research Centre · ITUnited States Food and Drug Administration · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Costs, scientific and ethical concerns related to animal tests for regulatory decision-making have stimulated the development of alternative methods. When applying alternative approaches, kinetics have been identified as a key element to consider. Membrane transporters affect the kinetic processes of absorption, distribution, metabolism and excretion (ADME) of various compounds, such as drugs or environmental chemicals. Therefore, pharmaceutical scientists have intensively studied transporters impacting drug efficacy and safety. Besides pharmacokinetics, transporters are considered as major determinant of toxicokinetics, potentially representing an essential piece of information in chemical risk assessment. To capture the applicability of transporter data for kinetic-based risk assessment in non-pharmaceutical sectors, the EU Reference Laboratory for Alternatives to Animal Testing (EURL ECVAM) created a survey with a view of identifying the improvements needed when using in vitro and in silico methods. Seventy-three participants, from different sectors and with various kinds of expertise, completed the survey. The results revealed that transporters are investigated mainly during drug development, but also for risk assessment purposes of food and feed contaminants, industrial chemicals, cosmetics, nanomaterials and in the context of environmental toxicology, by applying both in vitro and in silico tools. However, to rely only on alternative methods for chemical risk assessment, it is critical that the data generated by in vitro and in silico methods are scientific integer, reproducible and of high quality so that they are trusted by decision makers and used by industry. In line, the respondents identified various challenges related to the interpretation and use of transporter data from non-animal methods. Overall, it was determined that a combined mechanistically-anchored in vitro-in silico approach, validated against available human data, would gain confidence in using transporter data within an animal-free risk assessment paradigm. Finally, respondents involved primarily in fundamental research expressed lower confidence in non-animal studies to unravel complex transporter mechanisms.

Indexed as

Animal Testing AlternativesBiomedical ResearchRisk AssessmentAnimalsCattleComputer SimulationFemaleHumansLactationMembrane Transport ProteinsMiceRatsMembrane Transport ProteinsActive transportAlternative methodsChemical risk assessmentMembrane transportersSurveyToxicokinetics

Identifiers

PMID30015123
PMCPMC6162338
OpenAlexW2884803886

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.