Evidence map›Paper›PMID 30014279›Full record

ArticleNeuroinformatics2019

Towards Differential Connectomics with NeuroVIISAS.

Sebastian Schwanke, Jörg Jenssen, Peter Eipert, Oliver Schmitt

Abstract read
PubMed Publisher
In one paragraph

Article in Neuroinformatics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.1field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. The Cerebellar Connectome.Cerebellum (London, England) · 2026
    Article
  2. A Visual Interface for Exploring Hypotheses About Neural Circuits.IEEE transactions on visualization and computer graphics · 2024
    Article
  3. Article
  4. Article
  5. The brainstem connectome database.Scientific data · 2022
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sebastian SchwankeDepartment of Anatomy, University of Rostock, Gertrudenstr. 9, 18057, Rostock, Germany.
Jörg JenssenDepartment of Anatomy, University of Rostock, Gertrudenstr. 9, 18057, Rostock, Germany.
Peter EipertDepartment of Anatomy, University of Rostock, Gertrudenstr. 9, 18057, Rostock, Germany.
Oliver SchmittDepartment of Anatomy, University of Rostock, Gertrudenstr. 9, 18057, Rostock, Germany. schmitt@med.uni-rostock.de.ORCID http://orcid.org/0000-0002-1610-2103
University of Rostock · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The comparison of connectomes is an essential step to identify changes in structural and functional neuronal networks. However, the connectomes themselves as well as the comparisons of connectomes could be manifold. In most applications, comparisons of connectomes are applied to specific sets of data. In many studies collections of scripts are applied optimized for certain species (non-generic approaches) or diseases (control versus disease group connectomes). These collections of scripts have a limited functionality which do not support functional and topographic mappings of connectomes (hemispherical asymmetries, peripheral nervous system). The platform-independent and generic neuroVIISAS framework is built to circumvent limitations that come with variants of nomenclatures, connectivity lists and connectional hierarchies as well as restrictions to structural connectome analyses. A new analytical module is introduced into the framework to compare different types of connectomes and different representations of the same connectome within a unique software environment. As an example a differential analysis of the partial connectome of the laboratory rat that is based on virus tract tracing with the same regions of non-virus tract tracing has been performed. A relatively large connectional coherence between the two different techniques was found. However, some detected connections are described by virus tract-tracing only.

Indexed as

AnimalsBrainConnectomeRatsConnectomeDifferential connectomicsGraph analysisMultidimensional connectomesNervous systemNeuronal networksRatVisualization

Identifiers

PMID30014279
OpenAlexW2884261910

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.