Evidence map›Paper›PMID 30013162›Full record

ArticleThe ISME journal2018

The evolution of ecological facilitation within mixed-species biofilms in the mouse gastrointestinal tract.

Xiaoxi B Lin, Tuo Wang, Paul Stothard, Jukka Corander, Jun Wang, John F Baines, Sarah C L Knowles, Laima Baltrūnaitė, Guergana Tasseva, Robert Schmaltz and 6 more

Abstract read
In one paragraph

Article in The ISME journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
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  10. Microbe Profile: TheMicrobiology (Reading, England) · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. International journal of systematic and evolutionary microbiology · 2021
    Article
  19. Anticandidal Activities byFrontiers in oral health · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Xiaoxi B LinDepartment of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G 2R3, Canada. xlin3@ualberta.ca.
Tuo WangDepartment of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G 2R3, Canada.
Paul StothardDepartment of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G 2R3, Canada.
Jukka CoranderDepartment of Biostatistics, University of Oslo, 0317, Oslo, Norway.
Jun WangCAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
John F BainesInstitute of Experimental Medicine, Christian-Albrechts-Universität zu Kiel, Arnold-Heller-Straße 3, 24105, Kiel, Germany.
Sarah C L KnowlesDepartment of Pathobiology and Population Sciences, The Royal Veterinary College, Hawkshead Lane, Hatfield, Herfordshire, AL9 7TA, UK.
Laima BaltrūnaitėNature Research Centre, Akademijos Str. 2, LT-08412, Vilnius, Lithuania.
Guergana TassevaDepartment of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G 2R3, Canada.
Robert SchmaltzDepartment of Food Science and Technology, University of Nebraska, Lincoln, NE, 68588, USA.
Stephanie TollenaarDepartment of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G 2R3, Canada.
Liz A CodyDepartment of Food Science and Technology, University of Nebraska, Lincoln, NE, 68588, USA.
Theodore GrenierInstitut de Génomique Fonctionnelle de Lyon, Université de Lyon, Ecole Normale Supérieure de Lyon, Centre National de la Recherche Scientifique, Université Claude Bernard Lyon 1, Unité Mixte de Recherche 5242, 46 Allée d'Italie, 69364, Lyon Cedex 07, France.
Wei WuCollege of Engineering, China Agricultural University, 100083, Beijing, China.
Amanda E Ramer-TaitDepartment of Food Science and Technology, University of Nebraska, Lincoln, NE, 68588, USA.ORCID http://orcid.org/0000-0003-0950-7548
Jens WalterDepartment of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G 2R3, Canada. jwalter1@ualberta.ca.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The eco-evolutionary interactions among members of the vertebrate gut microbiota that ultimately result in host-specific communities are poorly understood. Here we show that Lactobacillus reuteri coexists with  species that belong to the Lactobacillus johnsonii cluster (L. johnsonii, L. gasseri, and L taiwanensis) in a taxonomically wide range of rodents, suggesting cohabitation over evolutionary times. The two dominant Lactobacillus species found in wild mice establish a commensalistic relationship in gastric biofilms when introduced together into germ-free mice in which L. reuteri facilitates colonization of L. taiwanensis. Genomic analysis revealed allopatric diversification in strains of both species that originated from geographically separated locations (Scotland and France). Allopatry of the strains resulted in reduced formation of mixed biofilms in vitro, indicating that interspecies interactions in gastric Lactobacillus-biofilms are the result of an adaptive evolutionary process that occurred in a biogeographical context. In summary, these findings suggest that members within the vertebrate gut microbiota can evolve inter-dependencies through ecological facilitation, which could represent one mechanism by which host-specific bacterial communities assemble across vertebrate species and an explanation for their spatial and biogeographic patterns.

Indexed as

Gastrointestinal MicrobiomeAnimalsBiofilmsBiological EvolutionGenomicsLactobacillusLimosilactobacillus reuteriMiceSymbiosis

Identifiers

PMID30013162
PMCPMC6193996

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.