Evidence map›Paper›PMID 30013059›Full record

ArticleNature communications2018

Mechanical architecture and folding of E. coli type 1 pilus domains.

Alvaro Alonso-Caballero, Jörg Schönfelder, Simon Poly, Fabiano Corsetti, David De Sancho, Emilio Artacho, Raul Perez-Jimenez

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 68 citations in OpenAlex.

  1. Review
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  13. One-step asparaginyl endopeptidase (RSC chemical biology · 2022
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  14. Review
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  19. Emergence of ResistantFrontiers in microbiology · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Alvaro Alonso-CaballeroCIC nanoGUNE, San Sebastian, 20018, Spain.
Jörg SchönfelderCIC nanoGUNE, San Sebastian, 20018, Spain.
Simon PolyCIC nanoGUNE, San Sebastian, 20018, Spain.
Fabiano CorsettiCIC nanoGUNE, San Sebastian, 20018, Spain.ORCID http://orcid.org/0000-0002-2275-436X
David De SanchoDonostia International Physics Center, San Sebastian, 20018, Spain.
Emilio ArtachoCIC nanoGUNE, San Sebastian, 20018, Spain.ORCID http://orcid.org/0000-0001-9357-1547
Raul Perez-JimenezCIC nanoGUNE, San Sebastian, 20018, Spain. r.perezjimenez@nanogune.eu.ORCID http://orcid.org/0000-0001-7094-6799
CIC nanoGUNE · ESIkerbasque · ESThomas Young Centre · GBUniversity of the Basque Country · ES

Funding

Ministry of Economy and Competitiveness | Consejo Superior de Investigaciones Científicas (Spanish National Research Council) BIO2016-77390-R
6 · The paper itself

Abstract

Uropathogenic Escherichia coli attach to tissues using pili type 1. Each pilus is composed by thousands of coiled FimA domains followed by the domains of the tip fibrillum, FimF-FimG-FimH. The domains are linked by non-covalent β-strands that must resist mechanical forces during attachment. Here, we use single-molecule force spectroscopy to measure the mechanical contribution of each domain to the stability of the pilus and monitor the oxidative folding mechanism of a single Fim domain assisted by periplasmic FimC and the oxidoreductase DsbA. We demonstrate that pilus domains bear high mechanical stability following a hierarchy by which domains close to the tip are weaker than those close to or at the pilus rod. During folding, this remarkable stability is achieved by the intervention of DsbA that not only forms strategic disulfide bonds but also serves as a chaperone assisting the folding of the domains.

Indexed as

Adhesins, Escherichia coliBinding SitesCloning, MolecularDisulfidesEscherichia coliEscherichia coli ProteinsFimbriae, BacterialFimbriae ProteinsGene ExpressionGenetic VectorsMicroscopy, Atomic ForceMolecular ChaperonesMolecular Dynamics SimulationProtein BindingProtein Conformation, alpha-HelicalProtein Conformation, beta-StrandAdhesins, Escherichia coliDisulfidesdsbA protein, E coliEscherichia coli ProteinsFimbriae ProteinsfimbrillinfimC protein, E coliFimF protein, E coliFimG protein, E colifimH protein, E coliMolecular ChaperonesProtein Disulfide-IsomerasesRecombinant Proteins

Identifiers

PMID30013059
PMCPMC6048123
OpenAlexW2837034412

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.