Evidence map›Paper›PMID 30011017›Full record

ArticleNucleic acids research2018

Parentally inherited long non-coding RNA Cyrano is involved in zebrafish neurodevelopment.

Mayuresh Anant Sarangdhar, Divya Chaubey, Nagesh Srikakulam, Beena Pillai

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 62 citations in OpenAlex.

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  11. Comparative Analysis of miRNA-mRNA Regulation in the Testes ofInternational journal of molecular sciences · 2023
    Article
  12. A Novel Cis-Regulatory lncRNA,Non-coding RNA · 2023
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Mayuresh Anant SarangdharCSIR-Institute of Genomics and Integrative Biology (IGIB), Mathura Road, New Delhi, India.
Divya ChaubeyCSIR-Institute of Genomics and Integrative Biology (IGIB), Mathura Road, New Delhi, India.
Nagesh SrikakulamCSIR-Institute of Genomics and Integrative Biology (IGIB), Mathura Road, New Delhi, India.
Beena PillaiCSIR-Institute of Genomics and Integrative Biology (IGIB), Mathura Road, New Delhi, India.
Institute of Genomics and Integrative Biology · INAcademy of Scientific and Innovative Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transfer of genetic material from parents to progeny via fusion of gametes is a way to ensure flow of information from one generation to the next. Apart from the genetic material, gametes provide a rich source of other factors such as RNA and proteins which can control traits of the embryo. Non-coding RNAs are not only carriers of regulatory information but can also encode memory of events of parental life. Here, we explore the possibility of parental inheritance of non-coding RNAs, especially long non-coding RNAs. Meta-analysis of RNA-seq data revealed several non-coding RNAs present in zebrafish oocyte, sperm and 2cell-stage. The embryo is transcriptionally silent at this stage, we rationalize that all the RNAs detectable at 2cell-stage are deposited either by sperm or oocyte or both and thus inherited. In the inherited pool, we noticed a conserved lncRNA, Cyrano previously known for zebrafish brain development. Knockdown of inherited Cyrano by miR-7 without changing zygotic Cyrano altered brain morphology at 24 hpf and 48 hpf. This defect could be partially rescued by injecting full length Cyrano lncRNA or a mutant resilient to knock-down by miR-7. In future, there is ample scope to check the possibility of inherited lncRNAs as carriers of memory of parental life events and building blocks that set up an initial platform for development.

Indexed as

AnimalsAnimals, Genetically ModifiedBrainEmbryo, NonmammalianGene Expression Regulation, DevelopmentalGene Knockdown TechniquesGene Regulatory NetworksHigh-Throughput Nucleotide SequencingInheritance PatternsMicroRNAsRNA, Long NoncodingRNA, Messenger, StoredSequence Analysis, RNAZebrafishMicroRNAsRNA, Long NoncodingRNA, Messenger, Stored

Identifiers

PMID30011017
PMCPMC6182166
OpenAlexW2883739730

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.