Evidence map›Paper›PMID 30008705›Full record

ArticleFrontiers in microbiology2018

Lab to Field Assessment of the Ecotoxicological Impact of Chlorpyrifos, Isoproturon, or Tebuconazole on the Diversity and Composition of the Soil Bacterial Community.

Veronika Storck, Sofia Nikolaki, Chiara Perruchon, Camille Chabanis, Angela Sacchi, Giorgia Pertile, Céline Baguelin, Panagiotis A Karas, Aymé Spor, Marion Devers-Lamrani and 8 more

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Veronika StorckAgroSup Dijon, Institut National de la Recherche Agronomique, Université Bourgogne Franche-Comté, Agroécologie, Dijon, France.
Sofia NikolakiDepartment of Environmental and Natural Resources Management, University of Patras, Agrinio, Greece.
Chiara PerruchonLaboratory of Plant and Environmental Biotechnology, Department of Biochemistry and Biotechnology, University of Thessaly, Larissa, Greece.
Camille ChabanisEnoveo srl., Lyon, France.
Angela SacchiAeiforia srl, Spinoff Università Cattolica del Sacro Cuore, Fidenza, Italy.
Giorgia PertileAeiforia srl, Spinoff Università Cattolica del Sacro Cuore, Fidenza, Italy.
Céline BaguelinEnoveo srl., Lyon, France.
Panagiotis A KarasLaboratory of Plant and Environmental Biotechnology, Department of Biochemistry and Biotechnology, University of Thessaly, Larissa, Greece.
Aymé SporAgroSup Dijon, Institut National de la Recherche Agronomique, Université Bourgogne Franche-Comté, Agroécologie, Dijon, France.
Marion Devers-LamraniAgroSup Dijon, Institut National de la Recherche Agronomique, Université Bourgogne Franche-Comté, Agroécologie, Dijon, France.
Evangelia S PapadopoulouLaboratory of Plant and Environmental Biotechnology, Department of Biochemistry and Biotechnology, University of Thessaly, Larissa, Greece.
Olivier SibourgEnoveo srl., Lyon, France.
Cedric MalandainEnoveo srl., Lyon, France.
Marco TrevisanDepartment of Agronomy and Environmental and Chemistry, Catholic University of the Sacred Heart, Piacenza, Italy.
Federico FerrariAeiforia srl, Spinoff Università Cattolica del Sacro Cuore, Fidenza, Italy.
Dimitrios G KarpouzasLaboratory of Plant and Environmental Biotechnology, Department of Biochemistry and Biotechnology, University of Thessaly, Larissa, Greece.
George TsiamisDepartment of Environmental and Natural Resources Management, University of Patras, Agrinio, Greece.
Fabrice Martin-LaurentAgroSup Dijon, Institut National de la Recherche Agronomique, Université Bourgogne Franche-Comté, Agroécologie, Dijon, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pesticides are intentionally applied to agricultural fields for crop protection. They can harm non-target organisms such as soil microorganisms involved in important ecosystem functions with impacts at the global scale. Within the frame of the pesticide registration process, the ecotoxicological impact of pesticides on soil microorganisms is still based on carbon and nitrogen mineralization tests, despite the availability of more extensive approaches analyzing the abundance, activity or diversity of soil microorganisms. In this study, we used a high-density DNA microarray (PhyloChip) and 16S rDNA amplicon next-generation sequencing (NGS) to analyze the impact of the organophosphate insecticide chlorpyrifos (CHL), the phenyl-urea herbicide isoproturon (IPU), or the triazole fungicide tebuconazole (TCZ) on the diversity and composition of the soil bacterial community. To our knowledge, it is the first time that the combination of these approaches are applied to assess the impact of these three pesticides in a lab-to-field experimental design. The PhyloChip analysis revealed that although no significant changes in the composition of the bacterial community were observed in soil microcosms exposed to the pesticides, significant differences in detected operational taxonomic units (OTUs) were observed in the field experiment between pesticide treatments and control for all three tested pesticides after 70 days of exposure. NGS revealed that the bacterial diversity and composition varied over time. This trend was more marked in the microcosm than in the field study. Only slight but significant transient effects of CHL or TCZ were observed in the microcosm and the field study, respectively. IPU was not found to significantly modify the soil bacterial diversity or composition. Our results are in accordance with conclusions of the Environmental Food Safety Authority (EFSA), which concluded that these three pesticides may have a low risk toward soil microorganisms.

Indexed as

DNA microarraymicrobial ecotoxicologymicroorganismsnext-generation sequencingpesticidesoil

Identifiers

PMID30008705
PMCPMC6034002

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.