Evidence map›Paper›PMID 30008658›Full record

ArticleFrontiers in neuroscience2018

Random Forests Based Group Importance Scores and Their Statistical Interpretation: Application for Alzheimer's Disease.

Marie Wehenkel, Antonio Sutera, Christine Bastin, Pierre Geurts, Christophe Phillips

Abstract read
In one paragraph

Article in Frontiers in neuroscience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Marie WehenkelDepartment of Computer Science and Electrical Engineering, Montefiore Institute, University of Liège, Liège, Belgium.
Antonio SuteraDepartment of Computer Science and Electrical Engineering, Montefiore Institute, University of Liège, Liège, Belgium.
Christine BastinGIGA-CRC in vivo Imaging, University of Liège, Liège, Belgium.
Pierre GeurtsDepartment of Computer Science and Electrical Engineering, Montefiore Institute, University of Liège, Liège, Belgium.
Christophe PhillipsDepartment of Computer Science and Electrical Engineering, Montefiore Institute, University of Liège, Liège, Belgium.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Machine learning approaches have been increasingly used in the neuroimaging field for the design of computer-aided diagnosis systems. In this paper, we focus on the ability of these methods to provide interpretable information about the brain regions that are the most informative about the disease or condition of interest. In particular, we investigate the benefit of group-based, instead of voxel-based, analyses in the context of Random Forests. Assuming a prior division of the voxels into non overlapping groups (defined by an atlas), we propose several procedures to derive group importances from individual voxel importances derived from Random Forests models. We then adapt several permutation schemes to turn group importance scores into more interpretable statistical scores that allow to determine the truly relevant groups in the importance rankings. The good behaviour of these methods is first assessed on artificial datasets. Then, they are applied on our own dataset of FDG-PET scans to identify the brain regions involved in the prognosis of Alzheimer's disease.

Indexed as

Alzheimer's diseaseFDG-PETfeature selectiongroup-based methodmachine learningprognosis systemrandom forests

Identifiers

PMID30008658
PMCPMC6034092

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.