Evidence map›Paper›PMID 30008298›Full record

ArticleNeuron2018

Rapid Cue-Specific Remodeling of the Nascent Axonal Proteome.

Roberta Cagnetta, Christian K Frese, Toshiaki Shigeoka, Jeroen Krijgsveld, Christine E Holt

Open access · hybridAbstract read
In one paragraph

Article in Neuron, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
10.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 148 citations in OpenAlex.

  1. Review
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  7. Review
  8. Materiobiology in the omics era.Materials today. Bio · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. RNA in axons, dendrites, synapses and beyond.Frontiers in molecular neuroscience · 2024
    Review
  17. Article
  18. Article
  19. Control of Selective mRNA Translation in Neuronal Subcellular Compartments in Health and Disease.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Review
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Roberta CagnettaDepartment of Physiology Development and Neuroscience, Downing Street, University of Cambridge, Cambridge CB2 3DY, UK.
Christian K FreseEuropean Molecular Biology Laboratory (EMBL), Meyerhofstr. 1, Heidelberg 69117, Germany; German Cancer Research Center (DKFZ), Im Neuenheimer Feld 581, Heidelberg 69120, Germany; CECAD Research Center, University of Cologne, Joseph-Stelzmann-Str. 26, Cologne 50931, Germany.
Toshiaki ShigeokaDepartment of Physiology Development and Neuroscience, Downing Street, University of Cambridge, Cambridge CB2 3DY, UK.
Jeroen KrijgsveldEuropean Molecular Biology Laboratory (EMBL), Meyerhofstr. 1, Heidelberg 69117, Germany; German Cancer Research Center (DKFZ), Im Neuenheimer Feld 581, Heidelberg 69120, Germany; Excellence Cluster CellNetworks, University of Heidelberg, Im Neuenheimer Feld 581, Heidelberg 69120, Germany. Electronic address: j.krijgsveld@dkfz.de.
Christine E HoltDepartment of Physiology Development and Neuroscience, Downing Street, University of Cambridge, Cambridge CB2 3DY, UK. Electronic address: ceh33@cam.ac.uk.
University of Cambridge · GBGerman Cancer Research Center · DE

Funding

Wellcome Trust
6 · The paper itself

Abstract

Axonal protein synthesis and degradation are rapidly regulated by extrinsic signals during neural wiring, but the full landscape of proteomic changes remains unknown due to limitations in axon sampling and sensitivity. By combining pulsed stable isotope labeling of amino acids in cell culture with single-pot solid-phase-enhanced sample preparation, we characterized the nascent proteome of isolated retinal axons on an unparalleled rapid timescale (5 min). Our analysis detects 350 basally translated axonal proteins on average, including several linked to neurological disease. Axons stimulated by different cues (Netrin-1, BDNF, Sema3A) show distinct signatures with more than 100 different nascent protein species up- or downregulated within the first 5 min followed by further dynamic remodeling. Switching repulsion to attraction triggers opposite regulation of a subset of common nascent proteins. Our findings thus reveal the rapid remodeling of the axonal proteomic landscape by extrinsic cues and uncover a logic underlying attraction versus repulsion.

Indexed as

AnimalsAxonsBrain-Derived Neurotrophic FactorCells, CulturedEmbryo, NonmammalianGene Expression RegulationIsotope LabelingMass SpectrometryNetrin-1Neuronal OutgrowthProteomeProteomicsRetinal Ganglion CellsSemaphorin-3AXenopus laevisBrain-Derived Neurotrophic FactorNetrin-1ProteomeSemaphorin-3Aaxonaxon guidancechemotropic responseextrinsic cuesgrowth conelocal protein synthesisneural wiringproteomicspSILAC-SP3retinal ganglion cell

Identifiers

PMID30008298
PMCPMC6048689
OpenAlexW2810731012

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.