Evidence map›Paper›PMID 30006849›Full record

ArticleJournal of mathematical neuroscience2018

What Is Required for Neuronal Calcium Waves? A Numerical Parameter Study.

Markus Breit, Gillian Queisser

Open access · hybridAbstract read
In one paragraph

Article in Journal of mathematical neuroscience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Modeling traveling calcium waves in cellular structures.Journal of computational neuroscience · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Markus BreitG-CSC, Goethe University Frankfurt, Frankfurt am Main, Germany.
Gillian QueisserDepartment of Mathematics, Temple University, Philadelphia, USA. gillian.queisser@temple.edu.ORCID http://orcid.org/0000-0003-4691-5276
Goethe University Frankfurt · DETemple University · US

Funding

CRCNS: Collaboration toward an experimentally validated multiscale model of rTMSR01MH118930 · NIMH · TEMPLE UNIV OF THE COMMONWEALTH · PI QUEISSER, GILLIAN · 2018 to 2020
$497k
Bundesministerium für Bildung und Forschung 01GQ1410BNIMH NIH HHS R01 MH118930
6 · The paper itself

Abstract

Neuronal calcium signals propagating by simple diffusion and reaction with mobile and stationary buffers are limited to cellular microdomains. The distance intracellular calcium signals can travel may be significantly increased by means of calcium-induced calcium release from internal calcium stores, notably the endoplasmic reticulum. The organelle, which can be thought of as a cell-within-a-cell, is able to sequester large amounts of cytosolic calcium ions via SERCA pumps and selectively release them into the cytosol through ryanodine receptor channels leading to the formation of calcium waves. In this study, we set out to investigate the basic properties of such dendritic calcium waves and how they depend on the three parameters dendrite radius, ER radius and ryanodine receptor density in the endoplasmic membrane. We demonstrate that there are stable and abortive regimes for calcium waves, depending on the above morphological and physiological parameters. In stable regimes, calcium waves can travel across long dendritic distances, similar to electrical action potentials. We further observe that abortive regimes exist, which could be relevant for spike-timing dependent plasticity, as travel distances and wave velocities vary with changing intracellular architecture. For some of these regimes, analytic functions could be derived that fit the simulation data. In parameter spaces, that are non-trivially influenced by the three-dimensional calcium concentration profile, we were not able to derive such a functional description, demonstrating the mathematical requirement to model and simulate biochemical signaling in three-dimensional space.

Indexed as

3D modelingCalcium wavesEndoplasmic reticulumNumerical simulationRyanodine receptorsStructure-function interplay

Identifiers

PMID30006849
PMCPMC6045568
OpenAlexW2884288897

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.