Evidence map›Paper›PMID 30006820›Full record

ArticleInternational journal of computer assisted radiology and surgery2018

Toward a standard ontology of surgical process models.

Bernard Gibaud, Germain Forestier, Carolin Feldmann, Giancarlo Ferrigno, Paulo Gonçalves, Tamás Haidegger, Chantal Julliard, Darko Katić, Hannes Kenngott, Lena Maier-Hein and 10 more

Abstract read
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In one paragraph

Article in International journal of computer assisted radiology and surgery, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
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  6. Article
  7. Article
  8. Article
  9. An ontology-based tool for modeling and documenting events in neurosurgery.BMC medical informatics and decision making · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. A methodology for the annotation of surgical videos for supervised machine learning applications.International journal of computer assisted radiology and surgery · 2023
    Review
  14. Article
  15. Artificial intelligence and automation in endoscopy and surgery.Nature reviews. Gastroenterology & hepatology · 2023
    Review
  16. Article
  17. Service-oriented Device Connectivity interface for a situation recognition system in the OR.International journal of computer assisted radiology and surgery · 2022
    Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Bernard GibaudInserm, LTSI - UMR_S 1099, Univ Rennes, Rennes, France. bernard.gibaud@univ-rennes1.fr.ORCID http://orcid.org/0000-0002-1772-4887
Germain ForestierMIPS Laboratory, University of Haute-Alsace, Mulhouse, France.
Carolin FeldmannDivision of Computer Assisted Medical Interventions, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Giancarlo FerrignoNEARLAB, Politecnico di Milano, Milan, Italy.
Paulo GonçalvesInstituto Politécnico de Castelo Branco, Castelo Branco, Portugal.
Tamás HaideggerAntal Bejczy Center for Intelligent Robotics, Óbuda University, Budapest, Hungary.
Chantal JulliardInserm, LTSI - UMR_S 1099, Univ Rennes, Rennes, France.
Darko KatićKarlsruhe Institute of Technology, Institute for Anthropomatics and Robotics, Karlsruhe, Germany.
Hannes KenngottDepartment of General, Abdominal and Transplantation Surgery, University of Heidelberg, Heidelberg, Germany.
Lena Maier-HeinDivision of Computer Assisted Medical Interventions, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Keno MärzDivision of Computer Assisted Medical Interventions, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Elena de MomiNEARLAB, Politecnico di Milano, Milan, Italy.
Dénes Ákos NagyAntal Bejczy Center for Intelligent Robotics, Óbuda University, Budapest, Hungary.
Hirenkumar NakawalaNEARLAB, Politecnico di Milano, Milan, Italy.
Juliane NeumannInnovation Center Computer Assisted Surgery, Leipzig University, Leipzig, Germany.
Thomas NeumuthInnovation Center Computer Assisted Surgery, Leipzig University, Leipzig, Germany.
Javier Rojas BalderramaInserm, LTSI - UMR_S 1099, Univ Rennes, Rennes, France.
Stefanie SpeidelNational Center for Tumor Diseases (NCT), Dresden, Germany.
Martin WagnerDepartment of General, Abdominal and Transplantation Surgery, University of Heidelberg, Heidelberg, Germany.
Pierre JanninInserm, LTSI - UMR_S 1099, Univ Rennes, Rennes, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThe development of common ontologies has recently been identified as one of the key challenges in the emerging field of surgical data science (SDS). However, past and existing initiatives in the domain of surgery have mainly been focussing on individual groups and failed to achieve widespread international acceptance by the research community. To address this challenge, the authors of this paper launched a European initiative-OntoSPM Collaborative Action-with the goal of establishing a framework for joint development of ontologies in the field of SDS. This manuscript summarizes the goals and the current status of the international initiative.

methodsA workshop was organized in 2016, gathering the main European research groups having experience in developing and using ontologies in this domain. It led to the conclusion that a common ontology for surgical process models (SPM) was absolutely needed, and that the existing OntoSPM ontology could provide a good starting point toward the collaborative design and promotion of common, standard ontologies on SPM.

resultsThe workshop led to the OntoSPM Collaborative Action-launched in mid-2016-with the objective to develop, maintain and promote the use of common ontologies of SPM relevant to the whole domain of SDS. The fundamental concept, the architecture, the management and curation of the common ontology have been established, making it ready for wider public use.

conclusionThe OntoSPM Collaborative Action has been in operation for 24 months, with a growing dedicated membership. Its main result is a modular ontology, undergoing constant updates and extensions, based on the experts' suggestions. It remains an open collaborative action, which always welcomes new contributors and applications.

Indexed as

Biological OntologiesMinimally Invasive Surgical ProceduresModels, AnatomicPattern Recognition, AutomatedEuropeHumansInternational Cooperation

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.