Evidence map›Paper›PMID 30005866›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2018

Global Transcriptional Response to CRISPR/Cas9-AAV6-Based Genome Editing in CD34

M Kyle Cromer, Sriram Vaidyanathan, Daniel E Ryan, Bo Curry, Anne Bergstrom Lucas, Joab Camarena, Milan Kaushik, Sarah R Hay, Renata M Martin, Israel Steinfeld and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed, 1 pooled it
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 1 synthesis or guideline pooled it, 115 citations in OpenAlex.

  1. Pooled it
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  7. Beta thalassemia syndromes: New insights.World journal of clinical cases · 2025
    Review
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  10. Safety and efficacy studies of CRISPR-Cas9 treatment of sickle cell disease highlights disease-specific responses.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
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10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

M Kyle CromerDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Sriram VaidyanathanDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Daniel E RyanAgilent Technologies, Santa Clara, CA 95051, USA.
Bo CurryAgilent Technologies, Santa Clara, CA 95051, USA.
Anne Bergstrom LucasAgilent Technologies, Santa Clara, CA 95051, USA.
Joab CamarenaDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Milan KaushikDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Sarah R HayDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Renata M MartinDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Israel SteinfeldAgilent Technologies, Santa Clara, CA 95051, USA.
Rasmus O BakDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Daniel P DeverDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Ayal HendelInstitute for Nanotechnology and Advanced Materials, The Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat Gan 5290002, Israel. Electronic address: ayal.hendel@biu.ac.il.
Laurakay BruhnAgilent Technologies, Santa Clara, CA 95051, USA.
Matthew H PorteusDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA. Electronic address: mporteus@stanford.edu.
Stanford University · USAgilent Technologies (United States) · USBar-Ilan University · IL

Funding

Program in Translational and Experimental HematologyT32HL120824 · NHLBI · STANFORD UNIVERSITY · PI MAJETI, RAVINDRA · 2014 to 2023
$2.4M
Genome Editing by Homologous Recombination to Create HIV Resistant Immune SystemR01AI120766 · NIAID · STANFORD UNIVERSITY · PI PORTEUS, MATTHEW H · 2015 to 2019
$2.0M
Pre-Clinical Development of Nuclease Mediated Gene Therapy for SCIDR01AI097320 · NIAID · STANFORD UNIVERSITY · PI PORTEUS, MATTHEW H · 2013 to 2017
$1.9M
NHLBI NIH HHS T32 HL120824NIAID NIH HHS R01 AI097320NIAID NIH HHS R01 AI120766
6 · The paper itself

Abstract

Genome-editing technologies are currently being translated to the clinic. However, cellular effects of the editing machinery have yet to be fully elucidated. Here, we performed global microarray-based gene expression measurements on human CD34

Indexed as

Genetic TherapyAntigens, CD34CRISPR-Associated Protein 9CRISPR-Cas SystemsDependovirusElectroporationGene EditingGene Expression RegulationGenetic VectorsHematopoietic Stem CellsHematopoietic Stem Cell TransplantationHumansMicroarray AnalysisParvovirinaeStem CellsAntigens, CD34CRISPR-Associated Protein 9genome editinghematopoietic stem cellsRNA expression analysis

Identifiers

PMID30005866
PMCPMC6171165
OpenAlexW2810487964

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.