Evidence map›Paper›PMID 30005191›Full record

ArticleJournal of magnetic resonance (San Diego, Calif. : 1997)2018

Optimization-based image reconstruction from sparsely sampled data in electron paramagnetic resonance imaging.

Zhiwei Qiao, Zheng Zhang, Xiaochuan Pan, Boris Epel, Gage Redler, Dan Xia, Howard Halpern

Abstract read
In one paragraph

Article in Journal of magnetic resonance (San Diego, Calif. : 1997), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Directional TV algorithm for fast EPR imaging.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2024
    Article
  4. Article
  5. An iterative reconstruction algorithm without system matrix for EPR imaging.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2022
    Article
  6. A balanced total-variation-Chambolle-Pock algorithm for EPR imaging.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Zhiwei QiaoSchool of Computer and Information Technology, Shanxi University, Taiyuan, Shanxi 030006, China; Department of Radiation and Cellular Oncology, The University of Chicago, 5841 South Maryland Avenue, Chicago, IL 60637, USA; Key Laboratory of Computational Intelligence and Chinese Information Processing of Ministry of Education, Taiyuan, Shanxi 030006, China. Electronic address: zqiao@sxu.edu.cn.
Zheng ZhangDepartment of Radiology, The University of Chicago, 5841 South Maryland Avenue, Chicago, IL 60637, USA. Electronic address: zhangzh@uchicago.edu.
Xiaochuan PanDepartment of Radiation and Cellular Oncology, The University of Chicago, 5841 South Maryland Avenue, Chicago, IL 60637, USA; Department of Radiology, The University of Chicago, 5841 South Maryland Avenue, Chicago, IL 60637, USA. Electronic address: xpan@uchicago.edu.
Boris EpelDepartment of Radiation and Cellular Oncology, The University of Chicago, 5841 South Maryland Avenue, Chicago, IL 60637, USA. Electronic address: bepel@uchicago.edu.
Gage RedlerDepartment of Radiation and Cellular Oncology, The University of Chicago, 5841 South Maryland Avenue, Chicago, IL 60637, USA. Electronic address: gage@uchicago.edu.
Dan XiaDepartment of Radiology, The University of Chicago, 5841 South Maryland Avenue, Chicago, IL 60637, USA. Electronic address: danxia@uchicago.edu.
Howard HalpernDepartment of Radiation and Cellular Oncology, The University of Chicago, 5841 South Maryland Avenue, Chicago, IL 60637, USA. Electronic address: hhalpern@uchicago.edu.
University of Chicago · USShanxi University · CN

Funding

Very Low Frequency EPR Imaging in Vivo Phisiology P41 EB02034P41EB002034 · NIBIB · UNIVERSITY OF CHICAGO · PI HALPERN, HOWARD J · 2003 to 2017
$16.1M
Radiation Biology of EPR Oxygen ImagesR01CA098575 · NCI · UNIVERSITY OF CHICAGO · PI HALPERN, HOWARD J · 2003 to 2022
$4.5M
Digital Specimen Tomosynthesis for Volumetric Imaging of Lumpectomy SpecimensR01EB018102 · NIBIB · UNIVERSITY OF CHICAGO · PI PAN, XIAOCHUAN · 2014 to 2017
$2.0M
Development of Advanced C-arm Cone-Beam CT for the Treatment of Liver CancerR01CA182264 · NCI · UNIVERSITY OF CHICAGO · PI PAN, XIAOCHUAN · 2014 to 2017
$1.8M
Optimization of Cancer Therapy guided by oxygen, pH, thiol and other parametric imagesR50CA211408 · NCI · UNIVERSITY OF CHICAGO · PI EPEL, BORIS · 2016 to 2020
$637k
NCI NIH HHS R01 CA098575NCI NIH HHS R01 CA182264NCI NIH HHS R50 CA211408NIBIB NIH HHS P41 EB002034NIBIB NIH HHS R01 EB018102
6 · The paper itself

Abstract

Electron paramagnetic resonance imaging (EPRI) can yield information about the 3-dimensional (3D) spatial distribution of the unpaired-electron-spin density from which the spatial distribution of oxygen concentration within tumor tissue, referred to as the oxygen image or electron paramagnetic resonance (EPR) image in this work, can be derived. Existing algorithms for reconstruction of EPR images often require data collected at a large number of densely sampled projection views, resulting in a prolonged data-acquisition time and consequently numerous practical challenges especially to in vivo animal EPRI. Therefore, a strong interest exists in shortening data-acquisition time through reducing the number of data samples collected in EPRI, and one approach is to acquire data at a reduced number of sparsely distributed projection views from which existing algorithms may reconstruct images with prominent artifacts. In this work, we investigate and develop an optimization-based technique for image reconstruction from data collected at sparsely sampled projection views for reducing scanning time in EPRI. Specifically, we design a convex optimization program in which the EPR image of interest is formulated as a solution and then tailor the Chambolle-Pock (CP) primal-dual algorithm to reconstruct the image by solving the convex optimization program. Using computer-simulated EPRI data from numerical phantoms and real EPRI data collected from physical phantoms, we perform studies on the verification and characterization of the optimization-based technique for EPR image reconstruction. Results of the studies suggest that the technique may yield accurate EPR images from data collected at sparsely distributed projection views, thus potentially enabling fast EPRI with reduced acquisition time.

Indexed as

AlgorithmsAnimalsArtifactsComputer SimulationElectron Spin Resonance SpectroscopyImage Processing, Computer-AssistedImaging, Three-DimensionalPhantoms, ImagingReproducibility of ResultsChambolle-Pock algorithmElectron paramagnetic resonance imaging (EPRI)OptimizationOxygen imagingSparse reconstruction

Identifiers

PMID30005191
PMCPMC12131877
OpenAlexW2810434408

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.