Evidence map›Paper›PMID 30003496›Full record

ArticleBiodegradation2018

Evaluating the mycostimulation potential of select carbon amendments for the degradation of a model PAH by an ascomycete strain enriched from a superfund site.

Lauren M Czaplicki, Monika Dharia, Ellen M Cooper, P Lee Ferguson, Claudia K Gunsch

Open access · greenAbstract read
In one paragraph

Article in Biodegradation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Mycoremediation: Expunging environmental pollutants.Biotechnology reports (Amsterdam, Netherlands) · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Lauren M CzaplickiDepartment of Civil & Environmental Engineering, Duke University, Durham, NC, USA.
Monika DhariaDepartment of Civil & Environmental Engineering, Duke University, Durham, NC, USA.
Ellen M CooperNicholas School of the Environment, Duke University, Durham, NC, USA.
P Lee FergusonDepartment of Civil & Environmental Engineering, Duke University, Durham, NC, USA.
Claudia K GunschDepartment of Civil & Environmental Engineering, Duke University, Durham, NC, USA. ckgunsch@duke.edu.
Duke University · US

Funding

Zebrafish as a Detector of Organophosphate ExposureP42ES010356 · NIEHS · DUKE UNIVERSITY · PI AMY H HERRING · 2000 to 2026
$56.2M
NIEHS NIH HHS P42 ES010356
6 · The paper itself

Abstract

Although ecological flexibility has been well documented in fungi, it remains unclear how this flexibility can be exploited for pollutant degradation, especially in the Ascomycota phylum. In this work, we assess three mycostimulation amendments for their ability to induce degradation in Trichoderma harzanium, a model fungus previously isolated from a Superfund site contaminated with polycyclic aromatic hydrocarbons. The amendments used in the present study were selected based on the documented ecological roles of ascomycetes. Chitin was selected to simulate the parasitic ecological role while cellulose and wood were selected to mimic bulk soil and wood saprobic conditions, respectively. Each amendment was tested in liquid basal medium in 0.1 and 1% (w/v) suspensions. Both chitin and cellulose amendments were shown to promote anthracene degradation in T. harzanium with the 0.1% chitin amendment resulting in over 90% removal of anthracene. None of the targets monitored for gene expression were found to be upregulated suggesting alternate pathways may be used in T. harzanium. Overall, our data suggest that mycostimulation amendments can be improved by understanding the ecological roles of indigenous fungi. However, further research is needed to better estimate specific amendment requirements for a broader group of target fungi and follow up studies are needed to determine whether the trends observed herein translate to more realistic soil systems.

Indexed as

Biodegradation, EnvironmentalAnthracenesAscomycotaBioreactorsCarbonChitinGene Expression Regulation, EnzymologicGene Expression Regulation, FungalPolycyclic Aromatic HydrocarbonsSoil MicrobiologySoil PollutantsTrichodermaanthraceneAnthracenesCarbonChitinPolycyclic Aromatic HydrocarbonsSoil PollutantsBioreactorsBioremediationMycoremediationPolycyclic aromatic hydrocarbonsTrichoderma harzianum

Identifiers

PMID30003496
PMCPMC6330244
OpenAlexW2883424621

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.