Evidence map›Paper›PMID 30003161›Full record

ArticleHeliyon2018

Single cell expression analysis of primate-specific retroviruses-derived HPAT lincRNAs in viable human blastocysts identifies embryonic cells co-expressing genetic markers of multiple lineages.

Gennadi Glinsky, Jens Durruthy-Durruthy, Mark Wossidlo, Edward J Grow, Jason L Weirather, Kin Fai Au, Joanna Wysocka, Vittorio Sebastiano

Open access · goldAbstract read
In one paragraph

Article in Heliyon, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 42 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Human endogenous retroviruses in development and disease.Computational and structural biotechnology journal · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Gennadi GlinskyInstitute of Engineering in Medicine, University of California, San Diego, 9500 Gilman Dr. MC 0435, La Jolla, CA 92093-0435, USA.
Jens Durruthy-DurruthyDepartment of Obstetrics and Gynecology, Institute for Stem Cell Biology & Regenerative Medicine, Stanford University, Stanford, CA 94305, USA.
Mark WossidloDepartment of Cell- and Developmental Biology, Center of Anatomy and Cell Biology, Schwarzspanierstrasse 17, 1090 Vienna, Austria.
Edward J GrowDepartment of Chemical and Systems Biology, Stanford University, Stanford, California, USA.
Jason L WeiratherDepartment of Internal Medicine, University of Iowa, Iowa City, IA, USA.
Kin Fai AuDepartment of Internal Medicine, University of Iowa, Iowa City, IA, USA.
Joanna WysockaDepartment of Chemical and Systems Biology, Stanford University, Stanford, California, USA.
Vittorio SebastianoDepartment of Obstetrics and Gynecology, Institute for Stem Cell Biology & Regenerative Medicine, Stanford University, Stanford, CA 94305, USA.
Stanford University · USUniversity of Iowa · USUniversity of California, San Diego · US

Funding

Bioinformatics platform for Hybrid-Seq transcriptome data analysisR01HG008759 · NHGRI · UNIVERSITY OF IOWA · PI AU, KIN FAI · 2016 to 2020
$1.9M
NHGRI NIH HHS R01 HG008759
6 · The paper itself

Abstract

Chromosome instability and aneuploidies occur very frequently in human embryos, impairing proper embryogenesis and leading to cell cycle arrest, loss of cell viability, and developmental failures in 50-80% of cleavage-stage embryos. This high frequency of cellular extinction events represents a significant experimental obstacle challenging analyses of individual cells isolated from human preimplantation embryos. We carried out single cell expression profiling of 241 individual cells recovered from 32 human embryos during the early and late stages of viable human blastocyst (VHB) differentiation. Classification of embryonic cells was performed solely based on expression patterns of human pluripotency-associated transcripts (

Indexed as

Developmental biology

Identifiers

PMID30003161
PMCPMC6039856
OpenAlexW2810513870

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.