Evidence map›Paper›PMID 30002723›Full record

ArticlePlant methods2018

In vivo monitoring of plant small GTPase activation using a Förster resonance energy transfer biosensor.

Hann Ling Wong, Akira Akamatsu, Qiong Wang, Masayuki Higuchi, Tomonori Matsuda, Jun Okuda, Ken-Ichi Kosami, Noriko Inada, Tsutomu Kawasaki, Takako Kaneko-Kawano and 4 more

Open access · goldAbstract read
In one paragraph

Article in Plant methods, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Resistance protein Pit interacts with the GEF OsSPK1 to activate OsRac1 and trigger rice immunity.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 3 countries.

Hann Ling Wong *1Laboratory of Plant Molecular Genetics, Graduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, 630-0192 Japan.
Akira Akamatsu *1Laboratory of Plant Molecular Genetics, Graduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, 630-0192 Japan.
Qiong Wang *4Present Address: Signal Transduction and Immunity Group, CAS Center for Excellence in Molecular Plant Sciences, Shanghai Center for Plant Stress Biology, Chinese Academy of Sciences, No. 3888 Chenhua Road, Shanghai, 201602 China.
Masayuki Higuchi1Laboratory of Plant Molecular Genetics, Graduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, 630-0192 Japan.
Tomonori Matsuda1Laboratory of Plant Molecular Genetics, Graduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, 630-0192 Japan.
Jun Okuda1Laboratory of Plant Molecular Genetics, Graduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, 630-0192 Japan.
Ken-Ichi Kosami4Present Address: Signal Transduction and Immunity Group, CAS Center for Excellence in Molecular Plant Sciences, Shanghai Center for Plant Stress Biology, Chinese Academy of Sciences, No. 3888 Chenhua Road, Shanghai, 201602 China.
Noriko Inada6College of Life, Environment, and Advanced, Osaka Prefecture University Sciences, Sakai, Osaka 599-8531 Japan.
Tsutomu Kawasaki1Laboratory of Plant Molecular Genetics, Graduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, 630-0192 Japan.
Takako Kaneko-Kawano8College of Pharmaceutical Sciences, Ritsumeikan University, Kusatsu, Japan.
Shingo NagawaCore Facility of Cell Biology, Shanghai Center for Plant Stress Biology, No. 3888 Chenhua Road, Shanghai, 201602 China.
Li TanCore Facility of Cell Biology, Shanghai Center for Plant Stress Biology, No. 3888 Chenhua Road, Shanghai, 201602 China.
Yoji Kawano1Laboratory of Plant Molecular Genetics, Graduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, 630-0192 Japan.ORCID 0000-0003-0687-2777
Ko Shimamoto1Laboratory of Plant Molecular Genetics, Graduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, 630-0192 Japan.
Nara Institute of Science and Technology · JPCenter for Excellence in Molecular Plant Sciences · CNChinese Academy of Sciences · CNKihara Institute for Biological Research · JPKwansei Gakuin University · JPOsaka Prefecture University · JPRitsumeikan University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSmall GTPases act as molecular switches that regulate various plant responses such as disease resistance, pollen tube growth, root hair development, cell wall patterning and hormone responses. Thus, to monitor their activation status within plant cells is believed to be the key step in understanding their roles.

resultsWe have established a plant version of a Förster resonance energy transfer (FRET) probe called Ras and interacting protein chimeric unit (Raichu) that can successfully monitor activation of the rice small GTPase OsRac1 during various defence responses in cells. Here, we describe the protocol for visualizing spatiotemporal activity of plant Rac/ROP GTPase in living plant cells, transfection of rice protoplasts with

conclusionsOur protocol should be adaptable for monitoring activation for other plant small GTPases and protein-protein interactions for other FRET sensors in various plant cells.

Indexed as

BioimagingFRET sensorPlant immunitySmall GTPase

Identifiers

PMID30002723
PMCPMC6035793
OpenAlexW2784899131

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.