Evidence map›Paper›PMID 30001418›Full record

ArticlePloS one2018

Phenotypic characterization of Gardnerella vaginalis subgroups suggests differences in their virulence potential.

Migle Janulaitiene, Vilmantas Gegzna, Lina Baranauskiene, Aistė Bulavaitė, Martynas Simanavicius, Milda Pleckaityte

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 69 citations in OpenAlex.

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  19. Research Progress on the Correlation BetweenFrontiers in cellular and infection microbiology · 2022
    Review
  20. Six Bacterial Vaginosis-Associated Species Can Form anFrontiers in cellular and infection microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Migle JanulaitieneInstitute of Biotechnology, Vilnius University, Vilnius, Lithuania.
Vilmantas GegznaInstitute of Photonics and Nanotechnology, Vilnius University, Vilnius, Lithuania.ORCID 0000-0002-9500-5167
Lina BaranauskieneInstitute of Biotechnology, Vilnius University, Vilnius, Lithuania.ORCID 0000-0002-9924-9177
Aistė BulavaitėInstitute of Biotechnology, Vilnius University, Vilnius, Lithuania.ORCID 0000-0002-4219-3985
Martynas SimanaviciusInstitute of Biotechnology, Vilnius University, Vilnius, Lithuania.
Milda PleckaityteInstitute of Biotechnology, Vilnius University, Vilnius, Lithuania.ORCID 0000-0002-3291-9033
Vilnius University · LT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The well-known genotypic and phenotypic diversity of G. vaginalis resulted in its classification into at least four subgroups (clades) with diverse genomic properties. To evaluate the virulence potential of G. vaginalis subgroups, we analyzed the virulence-related phenotypic characteristics of 14 isolates of clade 1, 12 isolates of clade 2, 8 isolates of clade 4 assessing their in vitro ability to grow as a biofilm, produce the toxin vaginolysin, and express sialidase activity. Significant differences in VLY production were found (p = 0.023), but further analysis of clade pairs did not confirm this finding. The amount of biofim did not differ significantly among the clades. Analysis of sialidase activity indicated statistically significant differences among the clades (p < 0.001). Production of active recombinant G. vaginalis sialidase demonstrated the link between the sld gene and enzymatic activity, which may be differentially regulated at the transcriptional level. Statistical classification analysis (random forests algorithm) showed that G. vaginalis clades could be best defined by the profiles of two phenotypic characteristics: sialidase activity and vaginolysin production. The results of principal component analysis and hierarchical clustering suggested that all isolates can be subgrouped into three clusters, the structures of which are determined based on phenotypic characteristics of the isolates. Clade 4 was the most homogenous group, as all isolates were found in the same cluster, which is characterized by low production of all studied virulence factors. Clade 2 isolates were mainly distributed between two clusters, whereas clade 1 isolates were found in all three clusters that were characterized by a distinct profile of phenotypic characteristics. Our findings suggest that G. vaginalis subgroups with different virulence potential might play distinct roles in vaginal microbiota.

Indexed as

Bacterial ProteinsBacterial ToxinsGardnerella vaginalisNeuraminidasePhenotypeFemaleHumansBacterial ProteinsBacterial ToxinsNeuraminidasevaginolysin, Gardnerella vaginalis

Identifiers

PMID30001418
PMCPMC6042761
OpenAlexW2867752270

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.