Evidence map›Paper›PMID 29999583›Full record

ArticleInfluenza and other respiratory viruses2018

A 627K variant in the PB2 protein of H9 subtype influenza virus in wild birds.

Ye Ge, Qiucheng Yao, Hongliang Chai, Yuping Hua, Guohua Deng, Hualan Chen

Open access · goldAbstract read
In one paragraph

Article in Influenza and other respiratory viruses, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

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  11. Avian influenza overview May - August 2018.EFSA journal. European Food Safety Authority · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Ye GeGuangdong Ocean University, Zhanjiang, Guangdong Province, China.ORCID 0000-0003-0080-1855
Qiucheng YaoGuangdong Ocean University, Zhanjiang, Guangdong Province, China.
Hongliang ChaiCollege of Wildlife Resources, Northeast Forestry University, Harbin, Heilongjiang Province, China.
Yuping HuaCollege of Wildlife Resources, Northeast Forestry University, Harbin, Heilongjiang Province, China.
Guohua DengState Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin, China.
Hualan ChenState Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin, China.
Chinese Academy of Agricultural Sciences · CNNortheast Forestry University · CNGuangdong Ocean University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWild birds are gaining increasing attention as gene-mixing reservoirs for influenza viruses. To investigate the molecular properties of the viruses isolated and epidemiological analysis of H9N2 subtype AIV in wild birds, we studied samples obtained over two years (2014-2015) from wetlands in Anhui province, China.

methodsA total of 4534 samples were collected from migratory waterfowl in Anhui in 2014-2015, and 8 strains of H9 subtype AIV were isolated.

resultsPhylogenetic analysis showed different degrees of gene segment reassortment in H9 viruses between the Eurasian lineage and the North American lineage. Most importantly, two viruses harbored the E627K mutation in the polymerase PB2 (PB2) protein. This is the first report of the mutation of this virus from low pathogenicity to high pathogenicity in wild birds.

conclusionsThe continued surveillance of wild birds, especially migratory birds, is important to provide early warning and control of AIV outbreaks. Our results highlight the high genetic diversity of AIV along the Eurasian-Australian migration flyway and the need for more extensive AIV surveillance in eastern China.

Indexed as

Mutation, MissenseAnimalsBirdsChinaGenetic VariationInfluenza A Virus, H9N2 SubtypeInfluenza in BirdsMutant ProteinsReassortant VirusesSequence Analysis, DNAViral ProteinsVirulence FactorsMutant ProteinsPB2 protein, influenza virusViral ProteinsVirulence FactorsepidemiologyH9N2 subtypeinfluenza virusphylogeny

Identifiers

PMID29999583
PMCPMC6185888
OpenAlexW2818032457

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.