Evidence map›Paper›PMID 29998470›Full record

ArticleCellular microbiology2018

Systematic gene overexpression in Candida albicans identifies a regulator of early adaptation to the mammalian gut.

Sadri Znaidi, Lasse van Wijlick, Arturo Hernández-Cervantes, Natacha Sertour, Jean-Luc Desseyn, Frédéric Vincent, Ralitsa Atanassova, Valérie Gouyer, Carol A Munro, Sophie Bachellier-Bassi and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Cellular microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 47 citations in OpenAlex.

  1. Exometabolome variation in the fungal pathogen of humansApplied and environmental microbiology · 2026
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  4. Microbiology and molecular biology reviews : MMBR · 2024
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  5. Transcriptional expression ofMicrobiology spectrum · 2024
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  7. Commensal fungi in intestinal health and disease.Nature reviews. Gastroenterology & hepatology · 2023
    Review
  8. Review
  9. International journal of molecular sciences · 2023
    Article
  10. Article
  11. Article
  12. Application of the Mutant Libraries forInternational journal of molecular sciences · 2022
    Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Antifungal and Antibiofilm Efficacy of Paeonol Treatment Against Biofilms ComprisingFrontiers in cellular and infection microbiology · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Sadri ZnaidiInstitut Pasteur, INRA, Unité Biologie et Pathogénicité Fongiques, Paris, France.ORCID 0000-0001-9238-2218
Lasse van WijlickInstitut Pasteur, INRA, Unité Biologie et Pathogénicité Fongiques, Paris, France.
Arturo Hernández-CervantesInstitut Pasteur, INRA, Unité Biologie et Pathogénicité Fongiques, Paris, France.
Natacha SertourInstitut Pasteur, INRA, Unité Biologie et Pathogénicité Fongiques, Paris, France.
Jean-Luc DesseynLille Inflammation Research International Center, UMR 995 Inserm, Université Lille 2, Faculté de Médecine, Lille, France.
Frédéric VincentUMR 1347, Université de Bourgogne, Dijon, France.
Ralitsa AtanassovaUMR 1347, Université de Bourgogne, Dijon, France.
Valérie GouyerLille Inflammation Research International Center, UMR 995 Inserm, Université Lille 2, Faculté de Médecine, Lille, France.
Carol A MunroMedical Research Council Centre for Medical Mycology at the University of Aberdeen, Institute of Medical Sciences, University of Aberdeen, Aberdeen, UK.
Sophie Bachellier-BassiInstitut Pasteur, INRA, Unité Biologie et Pathogénicité Fongiques, Paris, France.
Frédéric DalleUMR 1347, Université de Bourgogne, Dijon, France.
Thierry JouaultLille Inflammation Research International Center, UMR 995 Inserm, Université Lille 2, Faculté de Médecine, Lille, France.
Marie-Elisabeth BougnouxInstitut Pasteur, INRA, Unité Biologie et Pathogénicité Fongiques, Paris, France.
Christophe d'EnfertInstitut Pasteur, INRA, Unité Biologie et Pathogénicité Fongiques, Paris, France.
Institut Pasteur · FRInserm · FRUniversité de Bourgogne · FRHôpital Necker-Enfants Malades · FRTunis University · TNUniversity of Aberdeen · GB

Funding

Medical Research Council G0400284Medical Research Council MR/N006364/1Wellcome Trust WT088858MA
6 · The paper itself

Abstract

Candida albicans is part of the human gastrointestinal (GI) microbiota. To better understand how C. albicans efficiently establishes GI colonisation, we competitively challenged growth of 572 signature-tagged strains (~10% genome coverage), each conditionally overexpressing a single gene, in the murine gut. We identified CRZ2, a transcription factor whose overexpression and deletion respectively increased and decreased early GI colonisation. Using clues from genome-wide expression and gene-set enrichment analyses, we found that the optimal activity of Crz2p occurs under hypoxia at 37°C, as evidenced by both phenotypic and transcriptomic analyses following CRZ2 genetic perturbation. Consistent with early colonisation of the GI tract, we show that CRZ2 overexpression confers resistance to acidic pH and bile salts, suggesting an adaptation to the upper sections of the gut. Genome-wide location analyses revealed that Crz2p directly modulates the expression of many mannosyltransferase- and cell-wall protein-encoding genes, suggesting a link with cell-wall function. We show that CRZ2 overexpression alters cell-wall phosphomannan abundance and increases sensitivity to tunicamycin, suggesting a role in protein glycosylation. Our study reflects the powerful use of gene overexpression as a complementary approach to gene deletion to identify relevant biological pathways involved in C. albicans interaction with the host environment.

Indexed as

AnimalsCandida albicansCell WallFemaleFungal ProteinsGastrointestinal MicrobiomeGastrointestinal TractGene Expression Regulation, FungalGene Regulatory NetworksHydrogen-Ion ConcentrationMannansMannosyltransferasesMice, Inbred BALB CMicroorganisms, Genetically-ModifiedPromoter Regions, GeneticTunicamycinFungal ProteinsMannansMannosyltransferasesphosphomannanTunicamycinCandida albicanschromatin immunoprecipitation-on-chipCRZ2gastrointestinal colonisationregulatory networkssignature-tagged overexpressiontranscriptomics

Identifiers

PMID29998470
PMCPMC6220992
OpenAlexW2820082969

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.