ArticleFrontiers in plant science2018
Development of a High-Density Genetic Map Based on Specific Length Amplified Fragment Sequencing and Its Application in Quantitative Trait Loci Analysis for Yield-Related Traits in Cultivated Peanut.
Article in Frontiers in plant science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.
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38 citing papers in PubMed.
- Advances in mutant characterization for detecting causal mutations in crop plants.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Review
- Genetic mapping of time-to-maturity trait in hypogaea x fastigiata peanut background reveals a significant effect of pod-related and flowering pattern.BMC plant biology · 2025Article
- Genome-wide association analysis in peanut accessions uncovers the genetic basis regulating oil and fatty acid variation.BMC plant biology · 2025Article
- Article
- Using cross-country datasets for association mapping in Arachis hypogaea L.The plant genome · 2024Article
- Identification and Expression Profile ofInternational journal of molecular sciences · 2024Article
- Genome-wide association study and development of molecular markers for yield and quality traits in peanut (Arachis hypogaea L.).BMC plant biology · 2024Article
- Detection of two homologous major QTLs and development of diagnostic molecular markers for sucrose content in peanut.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Article
- Omics-driven advances in the understanding of regulatory landscape of peanut seed development.Frontiers in plant science · 2024Review
- Mapping QTLs for early leaf spot resistance and yield component traits using an interspecific AB-QTL population in peanut.Frontiers in plant science · 2024Article
- Whole-genome sequencing based discovery of candidate genes and diagnostic markers for seed weight in groundnut.The plant genome · 2023Article
- Article
- Identification of QTL for kernel weight and size and analysis of the pentatricopeptide repeat (PPR) gene family in cultivated peanut (Arachis hypogaea L.).BMC genomics · 2023Article
- Genetic analysis and exploration of major effect QTLs underlying oil content in peanut.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Advances in omics research on peanut response to biotic stresses.Frontiers in plant science · 2023Review
- Genetic mapping identifies genomic regions and candidate genes for seed weight and shelling percentage in groundnut.Frontiers in genetics · 2023Article
- QTL and Candidate Genes: Techniques and Advancement in Abiotic Stress Resistance Breeding of Major Cereals.International journal of molecular sciences · 2022Review
- Detection of a major QTL and development of KASP markers for seed weight by combining QTL-seq, QTL-mapping and RNA-seq in peanut.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Systematic trait dissection in oilseed rape provides a comprehensive view, further insight, and exact roadmap for yield determination.Biotechnology for biofuels and bioproducts · 2022Article
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10 authors.
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No grant is acknowledged in the PubMed record.
Abstract
High-density genetic maps (HDGMs) are very useful for genomic studies and quantitative trait loci (QTL) mapping. However, the low frequency of DNA polymorphisms in peanut has limited the quantity of available markers and hindered the construction of a HDGM. This study generated a peanut genetic map with the highest number of high-quality SNPs based on specific locus amplified fragment sequencing (SLAF-seq) technology and a newly constructed RIL population ("ZH16" × "sd-H1"). The constructed HDGM included 3,630 SNP markers belonging to 2,636 bins on 20 linkage groups (LGs), and it covers 2,098.14 cM in length, with an average marker distance of 0.58 cM. This HDGM was applied for the following collinear comparison, scaffold anchoring and analysis of genomic characterization including recombination rates and segregation distortion in peanut. For QTL mapping of investigated 14 yield-related traits, a total of 62 QTLs were detected on 12 chromosomes across 3 environments, and the co-localization of QTLs was observed for these traits which were significantly correlated on phenotype. Two stable co-located QTLs for seed- and pod-related traits were significantly identified in the chromosomal end of B06 and B07, respectively. The construction of HDGM and QTL analysis for yield-related traits in this study provide useful information for fine mapping and functional analysis of genes as well as molecular marker-assisted breeding.
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