Evidence map›Paper›PMID 29996889›Full record

ArticleParasites & vectors2018

Identification of Aedes aegypti cis-regulatory elements that promote gene expression in olfactory receptor neurons of distantly related dipteran insects.

Keshava Mysore, Ping Li, Molly Duman-Scheel

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. The regulatory genome of the malaria vectorNAR genomics and bioinformatics · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Recent advances and future perspectives in vector-omics.Current opinion in insect science · 2020
    Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Keshava MysoreDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, 1234 Notre Dame Avenue, Raclin-Carmichael Hall, South Bend, IN, 46617, USA.
Ping LiDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, 1234 Notre Dame Avenue, Raclin-Carmichael Hall, South Bend, IN, 46617, USA.
Molly Duman-ScheelDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, 1234 Notre Dame Avenue, Raclin-Carmichael Hall, South Bend, IN, 46617, USA. mscheel@nd.edu.ORCID http://orcid.org/0000-0003-1254-5369
University of Notre Dame · US

Funding

Cis-regulatory element discovery in a sequenced mosquito genomeR21AI117145 · NIAID · INDIANA UNIVERSITY INDIANAPOLIS · PI SCHEEL, MOLLY DUMAN · 2015 to 2016
$429k
Foundation for the National Institutes of Health R21AI117145-01NIAID NIH HHS R21 AI117145
6 · The paper itself

Abstract

backgroundSophisticated tools for manipulation of gene expression in select neurons, including neurons that regulate sexually dimorphic behaviors, are increasingly available for analysis of genetic model organisms. However, we lack comparable genetic tools for analysis of non-model organisms, including Aedes aegypti, a vector mosquito which displays sexually dimorphic behaviors that contribute to pathogen transmission. Formaldehyde-assisted isolation of regulatory elements followed by sequencing (FAIRE-seq) recently facilitated genome-wide discovery of putative A. aegypti cis-regulatory elements (CREs), many of which could be used to manipulate gene expression in mosquito neurons and other tissues. The goal of this investigation was to identify FAIRE DNA elements that promote gene expression in the olfactory system, a tissue of vector importance.

resultsEight A. aegypti CREs that promote gene expression in antennal olfactory receptor neurons (ORNs) were identified in a Drosophila melanogaster transgenic reporter screen. Four CREs identified in the screen were cloned upstream of GAL4 in a transgenic construct that is compatible with transformation of a variety of insect species. These constructs, which contained FAIRE DNA elements associated with the A. aegypti odorant coreceptor (orco), odorant receptor 1 (Or1), odorant receptor 8 (Or8) and fruitless (fru) genes, were used for transformation of A. aegypti. Six A. aegypti strains, including strains displaying transgene expression in all ORNs, subsets of these neurons, or in a sex-specific fashion, were isolated. The CREs drove transgene expression in A. aegypti that corresponded to endogenous gene expression patterns of the orco, Or1, Or8 and fru genes in the mosquito antenna. CRE activity in A. aegypti was found to be comparable to that observed in D. melanogaster reporter assays.

conclusionsThese results provide further evidence that FAIRE-seq, which can be paired with D. melanogaster reporter screening to test FAIRE DNA element activity in select tissues, is a useful method for identification of mosquito cis-regulatory elements. These findings expand the genetic toolkit available for the study of Aedes neurobiology. Moreover, given that the CREs drive comparable olfactory neural expression in both A. aegypti and D. melanogaster, it is likely that they may function similarly in multiple dipteran insects, including other disease vector mosquito species.

Indexed as

AedesAnimalsAnimals, Genetically ModifiedDNAFemaleGene Expression RegulationGenes, ReporterMaleMosquito VectorsOlfactory Receptor NeuronsRegulatory Elements, TranscriptionalSpecies SpecificityDNAAedes aegyptiAntennaDengueDrosophila melanogasterEnhancerFAIREMosquitoNeuronSensoryZika

Identifiers

PMID29996889
PMCPMC6042464
OpenAlexW2817624328

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.