Evidence map›Paper›PMID 29996108›Full record

ArticleCell reports2018

Genome-wide CRISPR-KO Screen Uncovers mTORC1-Mediated Gsk3 Regulation in Naive Pluripotency Maintenance and Dissolution.

Meng Li, Jason S L Yu, Katarzyna Tilgner, Swee Hoe Ong, Hiroko Koike-Yusa, Kosuke Yusa

Abstract read
In one paragraph

Article in Cell reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  8. Loss of histone deubiquitinase Bap1 triggers anti-tumor immunity.Cellular oncology (Dordrecht, Netherlands) · 2025
    Article
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  13. Review
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  15. The Current Situation and Development Prospect of Whole-Genome Screening.International journal of molecular sciences · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Meng LiWellcome Sanger Institute, Hinxton, Cambridge CB10 1SA, UK.
Jason S L YuWellcome Sanger Institute, Hinxton, Cambridge CB10 1SA, UK.
Katarzyna TilgnerWellcome Sanger Institute, Hinxton, Cambridge CB10 1SA, UK.
Swee Hoe OngWellcome Sanger Institute, Hinxton, Cambridge CB10 1SA, UK.
Hiroko Koike-YusaWellcome Sanger Institute, Hinxton, Cambridge CB10 1SA, UK.
Kosuke YusaWellcome Sanger Institute, Hinxton, Cambridge CB10 1SA, UK. Electronic address: ky1@sanger.ac.uk.

Funding

Wellcome Trust
6 · The paper itself

Abstract

The genetic basis of naive pluripotency maintenance and loss is a central question in embryonic stem cell biology. Here, we deploy CRISPR-knockout-based screens in mouse embryonic stem cells to interrogate this question through a genome-wide, non-biased approach using the Rex1GFP reporter as a phenotypic readout. This highly sensitive and efficient method identified genes in diverse biological processes and pathways. We uncovered a key role for negative regulators of mTORC1 in maintenance and exit from naive pluripotency and provided an integrated account of how mTORC1 activity influences naive pluripotency through Gsk3. Our study therefore reinforces Gsk3 as the central node and provides a comprehensive, data-rich resource that will improve our understanding of mechanisms regulating pluripotency and stimulate avenues for further mechanistic studies.

Indexed as

Gene Knockout TechniquesGenomeAnimalsCell DifferentiationCell Self RenewalClustered Regularly Interspaced Short Palindromic RepeatsGene Expression Regulation, DevelopmentalGlycogen Synthase Kinase 3Mechanistic Target of Rapamycin Complex 1MiceMice, KnockoutModels, BiologicalMouse Embryonic Stem CellsPhenotypePluripotent Stem CellsTranscriptomeGlycogen Synthase Kinase 3Mechanistic Target of Rapamycin Complex 1AktCRISPRexit from pluripotencyGATOR1mTORC1mTORC2naive pluripotencyNprl2screeningTsc2

Identifiers

PMID29996108
PMCPMC6057492

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.