Evidence map›Paper›PMID 29995569›Full record

ArticleCell cycle (Georgetown, Tex.)2018

Paip2 is localized to active promoters and loaded onto nascent mRNA in Drosophila.

Zaur M Kachaev, Lyubov A Lebedeva, Eugene N Kozlov, Ilya Y Toropygin, Paul Schedl, Yulii V Shidlovskii

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Zaur M Kachaeva Laboratory of Gene Expression Regulation in Development , Institute of Gene Biology, Russian Academy of Sciences , Moscow , Russia.
Lyubov A Lebedevaa Laboratory of Gene Expression Regulation in Development , Institute of Gene Biology, Russian Academy of Sciences , Moscow , Russia.ORCID 0000-0002-8373-0783
Eugene N Kozlova Laboratory of Gene Expression Regulation in Development , Institute of Gene Biology, Russian Academy of Sciences , Moscow , Russia.
Ilya Y Toropygind Center of Common Use "Human Proteome" , V.I. Orekhovich Research Institute of Biomedical Chemistry , Moscow , Russia.
Paul Schedla Laboratory of Gene Expression Regulation in Development , Institute of Gene Biology, Russian Academy of Sciences , Moscow , Russia.
Yulii V Shidlovskiia Laboratory of Gene Expression Regulation in Development , Institute of Gene Biology, Russian Academy of Sciences , Moscow , Russia.ORCID 0000-0002-3643-9889
Institute of Gene Biology · RUInstitute of Biomedical Chemistry · RUPrinceton University · USSechenov University · RU

Funding

Genetic regulatory mechanism in development and differentiationR35GM126975 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 2018 to 2022
$3.0M
Unexpected roles for BMP signaling in the specification of the embryonic germlineR01GM110015 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 2014 to 2017
$1.2M
NIGMS NIH HHS R01 GM110015NIGMS NIH HHS R35 GM126975
6 · The paper itself

Abstract

Paip2 (Poly(A)-binding protein - interacting protein 2) is a conserved metazoan-specific protein that has been implicated in regulating the translation and stability of mRNAs. However, we have found that Paip2 is not restricted to the cytoplasm but is also found in the nucleus in Drosophila embryos, salivary glands, testes, and tissue culture cells. Nuclear Paip2 is associated with chromatin, and in chromatin immunoprecipitation experiments it maps to the promoter regions of active genes. However, this chromatin association is indirect, as it is RNA-dependent. Thus, Paip2 is one more item in the growing list of translation factors that are recruited to mRNAs co-transcriptionally.

Indexed as

Promoter Regions, GeneticAnimalsCarrier ProteinsCell LineChromatinDrosophila melanogasterDrosophila ProteinsEmbryo, NonmammalianMalePoly(A)-Binding ProteinsProtein BindingRNA, MessengerTestisCarrier ProteinsChromatinDrosophila ProteinsPaip2 protein, DrosophilaPoly(A)-Binding ProteinsRNA, MessengermRNAnucleusPaip2promotertranscription

Identifiers

PMID29995569
PMCPMC6133343
OpenAlexW2822141983

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.