Evidence map›Paper›PMID 29995344›Full record

ArticleCurrent protocols in microbiology2018

In Vitro Culturing and Screening of Candida albicans Biofilms.

Megha Gulati, Matthew B Lohse, Craig L Ennis, Ruth E Gonzalez, Austin M Perry, Priyanka Bapat, Ashley Valle Arevalo, Diana L Rodriguez, Clarissa J Nobile

Abstract read
In one paragraph

Article in Current protocols in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Phenotypic and genotypic analysis ofInfection and immunity · 2026
    Article
  7. Disruption of thePathogens (Basel, Switzerland) · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Frontiers in cellular and infection microbiology · 2026
    Article
  16. Review
  17. Review
  18. TargetingInternational journal of molecular sciences · 2025
    Article
  19. Article
  20. An optimized protocol forbioRxiv : the preprint server for biology · 2025
    Article

20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Megha GulatiDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, Merced, California.
Matthew B LohseDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, California.
Craig L EnnisDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, Merced, California.
Ruth E GonzalezDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, Merced, California.
Austin M PerryDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, Merced, California.
Priyanka BapatDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, Merced, California.
Ashley Valle ArevaloDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, Merced, California.
Diana L RodriguezDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, Merced, California.
Clarissa J NobileDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, Merced, California.

Funding

Genetic regulation of inter- and intra-species microbial community formationR35GM124594 · NIGMS · UNIVERSITY OF CALIFORNIA, MERCED · PI NOBILE, CLARISSA JANE · 2017 to 2021
$2.0M
Development of Novel Protease Activity-Based Diagnostics for the Rapid Identification of Candida InfectionsR43AI131710 · NIAID · BIOSYNESIS, INC. · PI LOHSE, MATTHEW B. · 2017 to 2018
$596k
Regulation of Sexual Biofilm Development in Candida albicansR21AI125801 · NIAID · UNIVERSITY OF CALIFORNIA, MERCED · PI NOBILE, CLARISSA JANE · 2017 to 2018
$503k
NIAID NIH HHS R21 AI125801NIAID NIH HHS R43 AI131710NIGMS NIH HHS R35 GM124594
6 · The paper itself

Abstract

Candida albicans is a normal member of the human microbiota that asymptomatically colonizes healthy individuals, however it is also an opportunistic pathogen that can cause severe infections, especially in immunocompromised individuals. The medical impact of C. albicans depends, in part, on its ability to form biofilms, communities of adhered cells encased in an extracellular matrix. Biofilms can form on both biotic and abiotic surfaces, such as tissues and implanted medical devices. Once formed, biofilms are highly resistant to antifungal agents and the host immune system, and can act as a protected reservoir to seed disseminated infections. Here, we present several in vitro biofilm protocols, including protocols that are optimized for high-throughput screening of mutant libraries and antifungal compounds. We also present protocols to examine specific stages of biofilm development and protocols to evaluate interspecies biofilms that C. albicans forms with interacting microbial partners. © 2018 by John Wiley & Sons, Inc.

Indexed as

BiofilmsCandida albicansCandidiasisCell Culture TechniquesColorimetryHumansMicrofluidic Analytical TechniquesMicroscopy, Fluorescencebiofilm methodsbiofilm protocolsbiofilm screensCandida albicansinterspecies biofilms

Identifiers

PMID29995344
PMCPMC6105388

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.