Evidence map›Paper›PMID 29995199›Full record

ArticleVirus genes2018

Grapevine virus T is relatively widespread in Slovakia and Czech Republic and genetically diverse.

Miroslav Glasa, Lukáš Predajňa, Nina Sihelská, Katarína Šoltys, Ana Belén Ruiz-García, Antonio Olmos, Thierry Wetzel, Sead Sabanadzovic

Abstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. In-depth population genetic study ofFrontiers in plant science · 2025
    Article
  2. Analysis of Hop Stunt Viroid Diversity in Grapevine (Pathogens (Basel, Switzerland) · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 4 countries.

Miroslav GlasaInstitute of Virology, Biomedical Research Centre, Slovak Academy of Sciences, Dúbravská cesta 9, 84505, Bratislava, Slovakia. Miroslav.Glasa@savba.sk.
Lukáš PredajňaInstitute of Virology, Biomedical Research Centre, Slovak Academy of Sciences, Dúbravská cesta 9, 84505, Bratislava, Slovakia.
Nina SihelskáInstitute of Virology, Biomedical Research Centre, Slovak Academy of Sciences, Dúbravská cesta 9, 84505, Bratislava, Slovakia.
Katarína ŠoltysComenius University Science Park, Comenius University, Ilkovičova 8, 841 04, Bratislava, Slovakia.
Ana Belén Ruiz-GarcíaDepartment of Plant Pathology, Instituto Valenciano de Investigaciones Agrarias, Carretera Moncada a Náquera km 4.5, Moncada, 46113, Valencia, Spain.
Antonio OlmosDepartment of Plant Pathology, Instituto Valenciano de Investigaciones Agrarias, Carretera Moncada a Náquera km 4.5, Moncada, 46113, Valencia, Spain.
Thierry WetzelInstitute of Plant Protection, DLR Rheinpfalz, Breitenweg 71, 67435, Neustadt an der Weinstrasse, Germany.
Sead SabanadzovicDepartment of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Mississippi State, MS, 39762, USA.
Institute of Virology of the Slovak Academy of Sciences · SKInstituto Valenciano de Investigaciones Agrarias · ESBiomedical Research Center of the Slovak Academy of Sciences · SKComenius University Bratislava · SKDienstleistungszentrum Ländlicher Raum RheinpfalzMississippi State University · US

Funding

Agentúra na Podporu Výskumu a Vývoja APVV-15-0232European Cooperation in Science and Technology FA1407European rural development fund ITMS313021D075Vedecká Grantová Agentúra MŠVVaŠ SR a SAV VEGA 2/0036/16
6 · The paper itself

Abstract

A recently described putative foveavirus, grapevine virus T (GVT), was detected in a Slovak grapevine accession (SK704) using high-throughput sequencing, prompting further studies. Full-length genome sequence of isolate GVT-SK704 was determined. Analyses revealed 86.1% nucleotide identity with the Italian GVT isolate, currently the only available nearly complete sequence of GVT in GenBank. A virus-specific RT-PCR assay was developed, which enabled a survey of GVT incidence in grapevine samples from Slovakia and Czech Republic. Unexpectedly, GVT was present in ~ 30% of tested samples. Analysis of complete CP gene sequences of 20 Slovak and Czech GVT isolates detected in the survey revealed relatively high intra-species variability (up to 11.2% nucleotide divergence), suggesting multiple introductions from different sources, possibly over an extended period of time.

Indexed as

Genetic VariationCzech RepublicFlexiviridaeGenome, ViralGenomicsPhylogenyPlant DiseasesSlovakiaDiversityFoveavirusGrapevineGVTHigh-throughput sequencing

Identifiers

PMID29995199
OpenAlexW2864951880

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.