Evidence map›Paper›PMID 29995109›Full record

ArticleMemorias do Instituto Oswaldo Cruz2018

Genome sequence of a multidrug-resistant Corynebacterium striatum isolated from bloodstream infection from a nosocomial outbreak in Rio de Janeiro, Brazil.

Juliana Nunes Ramos, Izabel Dos Santos Rodrigues, Paulo Victor Pereira Baio, João Flávio Carneiro Veras, Rommel Thiago Jucá Ramos, Luis Gc Pacheco, Vasco Ariston Azevedo, Raphael Hirata Júnior, Michel Abanto Marín, Ana Luiza de Mattos-Guaraldi and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Memorias do Instituto Oswaldo Cruz, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Contribution of the Mobilome to the Configuration of the Resistome ofInternational journal of molecular sciences · 2024
    Article
  6. Rising prevalence and drug resistance ofFrontiers in cellular and infection microbiology · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Antibiotic resistance genes in the Actinobacteria phylum.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Juliana Nunes RamosFundação Oswaldo Cruz-Fiocruz, Instituto Nacional de Controle de Qualidade em Saúde, Rio de Janeiro, RJ, Brasil.
Izabel Dos Santos RodriguesFundação Oswaldo Cruz-Fiocruz, Instituto Nacional de Controle de Qualidade em Saúde, Rio de Janeiro, RJ, Brasil.
Paulo Victor Pereira BaioUniversidade do Estado do Rio de Janeiro, Faculdade de Ciências Médicas, Laboratório de Difteria e Corinebactérias de Importância Clínica, Rio de Janeiro, RJ, Brasil.
João Flávio Carneiro VerasFundação Oswaldo Cruz-Fiocruz, Instituto Nacional de Controle de Qualidade em Saúde, Rio de Janeiro, RJ, Brasil.
Rommel Thiago Jucá RamosUniversidade Federal do Pará, Centro de Genômica e Biologia de Sistemas, Belém, PA, Brasil.
Luis Gc PachecoUniversidade Federal da Bahia, Instituto de Ciências da Saúde, Salvador, BA, Brasil.
Vasco Ariston AzevedoUniversidade Federal de Minas Gerais, Instituto de Ciências Biológicas, Belo Horizonte, MG, Brasil.
Raphael Hirata JúniorUniversidade do Estado do Rio de Janeiro, Faculdade de Ciências Médicas, Laboratório de Difteria e Corinebactérias de Importância Clínica, Rio de Janeiro, RJ, Brasil.
Michel Abanto MarínUniversity of La Frontera, Scientific and Technological Bioresource Nucleus, Temuco, Chile.
Ana Luiza de Mattos-GuaraldiUniversidade do Estado do Rio de Janeiro, Faculdade de Ciências Médicas, Laboratório de Difteria e Corinebactérias de Importância Clínica, Rio de Janeiro, RJ, Brasil.
Verônica Viana VieiraFundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório Interdisciplinar de Pesquisas Médicas, Rio de Janeiro, RJ, Brasil.
Fundação Oswaldo Cruz · BRUniversidade do Estado do Rio de Janeiro · BRUniversidad de La Frontera · CLUniversidade Federal da Bahia · BRUniversidade Federal de Minas Gerais · BRUniversidade Federal do Pará · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multidrug-resistant (MDR) Corynebacterium striatum has been cited with increased frequency as pathogen of nosocomial infections. In this study, we report the draft genome of a C. striatum isolated from a patient with bloodstream infection in a hospital of Rio de Janeiro, Brazil. The isolate presented susceptibility only to tetracycline, vancomycin and linezolid. The detection of various antibiotic resistance genes is fully consistent with previously observed multidrug-resistant pattern in Corynebacterium spp. A large part of the pTP10 plasmid of MDR C. striatum M82B is present in the genome of our isolate. A SpaDEF cluster and seven arrays of CRISPR-Cas were found.

Indexed as

Anti-Bacterial AgentsBacteremiaBrazilCorynebacteriumCorynebacterium InfectionsCross InfectionDisease OutbreaksDrug Resistance, Multiple, BacterialElectrophoresis, Gel, Pulsed-FieldGenome, BacterialGenotypeHumansMicrobial Sensitivity TestsSequence Analysis, DNAAnti-Bacterial Agents

Identifiers

PMID29995109
PMCPMC6037045
OpenAlexW2884974799

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.