Evidence map›Paper›PMID 29993581›Full record

ArticleIEEE transactions on nanobioscience2018

MfeCNN: Mixture Feature Embedding Convolutional Neural Network for Data Mapping.

Dingcheng Li, Ming Huang, Xiaodi Li, Yaoping Ruan, Lixia Yao

Abstract read
In one paragraph

Article in IEEE transactions on nanobioscience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Deep learning in clinical natural language processing: a methodical review.Journal of the American Medical Informatics Association : JAMIA · 2020
    Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dingcheng Li
Ming Huang
Xiaodi Li
Yaoping Ruan
Lixia Yao

Funding

Mayo Clinic Center for Clinical and Translational Science (CCaTS UL1 Supplement - Dr. Timothy Curry)UL1TR002377 · NCATS · MAYO CLINIC ROCHESTER · PI VESNA D GAROVIC · 2017 to 2026
$78.4M
ZESTRIL VS. VERAPAMIL IN THE TREATMENT OF HYPERTENSIONM01RR000585 · NCRR · MAYO CLINIC ROCHESTER · PI RIZZA, ROBERT A. · 1985 to 2006
$30.4M
A research opportunity index to measure biomedical research disparities across the disease landscape.K01LM012102 · NLM · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI YAO, LIXIA · 2016 to 2018
$535k
NCATS NIH HHS UL1 TR002377NCRR NIH HHS M01 RR000585NLM NIH HHS K01 LM012102
6 · The paper itself

Abstract

Data mapping plays an important role in data integration and exchanges among institutions and organizations with different data standards. However, traditional rule-based approaches and machine learning methods fail to achieve satisfactory results for the data mapping problem. In this paper, we propose a novel and sophisticated deep learning framework for data mapping called mixture feature embedding convolutional neural network (MfeCNN). The MfeCNN model converts the data mapping task to a multiple classification problem. In the model, we incorporated multimodal learning and multiview embedding into a CNN for mixture feature tensor generation and classification prediction. Multimodal features were extracted from various linguistic spaces with a medical natural language processing package. Then, powerful feature embeddings were learned by using the CNN. As many as 10 classes could be simultaneously classified by a softmax prediction layer based on multiview embedding. MfeCNN achieved the best results on unbalanced data (average F1 score, 82.4%) among the traditional state-of-the-art machine learning models and CNN without mixture feature embedding. Our model also outperformed a very deep CNN with 29 layers, which took free texts as inputs. The combination of mixture feature embedding and a deep neural network can achieve high accuracy for data mapping and multiple classification.

Indexed as

Deep LearningNeural Networks, ComputerComputational BiologyData MiningHumansNatural Language ProcessingWorkflow

Identifiers

PMID29993581
PMCPMC6118402

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.