Evidence map›Paper›PMID 29991763›Full record

ArticleThe ISME journal2018

Bacterial community composition responds to changes in copepod abundance and alters ecosystem function in an Arctic mesocosm study.

Tatiana M Tsagaraki, Bernadette Pree, Øystein Leiknes, Aud Larsen, Gunnar Bratbak, Lise Øvreås, Jorun K Egge, Roman Spanek, Maria L Paulsen, Yngvar Olsen and 2 more

Abstract read
In one paragraph

Article in The ISME journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
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  3. Article
  4. Article
  5. Trade-offs of lipid remodeling in a marine predator-prey interaction in response to phosphorus limitation.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Tatiana M TsagarakiDepartment of Biological Sciences, University of Bergen, Bergen, Norway. tatiana.tsagaraki@uib.no.
Bernadette PreeDepartment of Biological Sciences, University of Bergen, Bergen, Norway.
Øystein LeiknesDepartment of Biology, NTNU Norwegian University of Science and Technology, Trondheim, Norway.
Aud LarsenDepartment of Biological Sciences, University of Bergen, Bergen, Norway.
Gunnar BratbakDepartment of Biological Sciences, University of Bergen, Bergen, Norway.
Lise ØvreåsDepartment of Biological Sciences, University of Bergen, Bergen, Norway.
Jorun K EggeDepartment of Biological Sciences, University of Bergen, Bergen, Norway.
Roman SpanekThe Institute of Mechatronics and Computer Engineering, Technical University of Liberec, Liberec, Czech Republic.ORCID http://orcid.org/0000-0002-4854-3720
Maria L PaulsenDepartment of Biological Sciences, University of Bergen, Bergen, Norway.
Yngvar OlsenDepartment of Biology, NTNU Norwegian University of Science and Technology, Trondheim, Norway.
Olav VadsteinDepartment of Biotechnology and Food Science, NTNU Norwegian University of Science and Technology, Trondheim, Norway.
T F ThingstadDepartment of Biological Sciences, University of Bergen, Bergen, Norway.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Combining a minimum food web model with Arctic microbial community dynamics, we have suggested that top-down control by copepods can affect the food web down to bacterial consumption of organic carbon. Pursuing this hypothesis further, we used the minimum model to design and analyse a mesocosm experiment, studying the effect of high (+Z) and low (-Z) copepod density on resource allocation, along an organic-C addition gradient. In the Arctic, both effects are plausible due to changes in advection patterns (affecting copepods) and meltwater inputs (affecting carbon). The model predicts a trophic cascade from copepods via ciliates to flagellates, which was confirmed experimentally. Auto- and heterotrophic flagellates affect bacterial growth rate and abundance via competition for mineral nutrients and predation, respectively. In +Z, the model predicts low bacterial abundance and activity, and little response to glucose; as opposed to clear glucose consumption effects in -Z. We observed a more resilient bacterial response to high copepods and demonstrate this was due to changes in bacterial community equitability. Species able to use glucose to improve their competitive and/or defensive properties, became predominant. The observed shift from a SAR11-to a Psychromonodaceae - dominated community suggests the latter was pivotal in this modification of ecosystem function. We argue that this group used glucose to improve its defensive or its competitive abilities (or both). Adding such flexibility in bacterial traits to the model, we show how it creates the observed resilience to top-down manipulations observed in our experiment.

Indexed as

Bacterial Physiological PhenomenaFood ChainAnimalsArctic RegionsAutotrophic ProcessesBacteriaCarbonCiliophoraCopepodaGlucoseHeterotrophic ProcessesMicrobiotaCarbonGlucose

Identifiers

PMID29991763
PMCPMC6194086

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.