Evidence map›Paper›PMID 29991752›Full record

ArticleScientific reports2018

Hydrothermal chimneys host habitat-specific microbial communities: analogues for studying the possible impact of mining seafloor massive sulfide deposits.

Yuchen Han, Giorgio Gonnella, Nicole Adam, Axel Schippers, Lia Burkhardt, Stefan Kurtz, Ulrich Schwarz-Schampera, Henrike Franke, Mirjam Perner

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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  4. Diversity and metabolic energy in bacteria.FEMS microbiology letters · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yuchen HanUniversität Hamburg, MIN-Fakultät, Biocenter Klein Flottbek, Molecular Biology of Microbial Consortia, Ohnhorststr. 18, 22609, Hamburg, Germany.
Giorgio GonnellaUniversität Hamburg, MIN-Fakultät, ZBH - Center for Bioinformatics, Bundesstraße 43, 20146, Hamburg, Germany.
Nicole AdamUniversität Hamburg, MIN-Fakultät, Biocenter Klein Flottbek, Molecular Biology of Microbial Consortia, Ohnhorststr. 18, 22609, Hamburg, Germany.
Axel SchippersFederal Institute for Geosciences and Natural Resources (BGR), Stilleweg 2, 30655, Hannover, Germany.
Lia BurkhardtHeinrich-Pette-Institut, Leibniz-Institute for Experimental Virology, Martinistraße 52, 20251, Hamburg, Germany.
Stefan KurtzUniversität Hamburg, MIN-Fakultät, ZBH - Center for Bioinformatics, Bundesstraße 43, 20146, Hamburg, Germany.
Ulrich Schwarz-SchamperaFederal Institute for Geosciences and Natural Resources (BGR), Stilleweg 2, 30655, Hannover, Germany.
Henrike FrankeFederal Institute for Geosciences and Natural Resources (BGR), Stilleweg 2, 30655, Hannover, Germany.
Mirjam PernerUniversität Hamburg, MIN-Fakultät, Biocenter Klein Flottbek, Molecular Biology of Microbial Consortia, Ohnhorststr. 18, 22609, Hamburg, Germany. mperner@geomar.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To assess the risk that mining of seafloor massive sulfides (SMS) from extinct hydrothermal vent environments has for changing the ecosystem irreversibly, we sampled SMS analogous habitats from the Kairei and the Pelagia vent fields along the Indian Ridge. In total 19.8 million 16S rRNA tags from 14 different sites were analyzed and the microbial communities were compared with each other and with publicly available data sets from other marine environments. The chimneys appear to provide habitats for microorganisms that are not found or only detectable in very low numbers in other marine habitats. The chimneys also host rare organisms and may function as a vital part of the ocean's seed bank. Many of the reads from active and inactive chimney samples were clustered into OTUs, with low or no resemblance to known species. Since we are unaware of the chemical reactions catalyzed by these unknown organisms, the impact of this diversity loss and bio-geo-coupling is hard to predict. Given that chimney structures can be considered SMS analogues, removal of sulfide deposits from the seafloor in the Kairei and Pelagia fields will most likely alter microbial compositions and affect element cycling in the benthic regions and probably beyond.

Indexed as

EcosystemMicrobiotaBiodiversityHydrothermal VentsIndian OceanMiningOceans and SeasSulfidesSulfides

Identifiers

PMID29991752
PMCPMC6039533

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.