Evidence map›Paper›PMID 29991697›Full record

ArticleBritish journal of cancer2018

Harnessing citizen science through mobile phone technology to screen for immunohistochemical biomarkers in bladder cancer.

Peter Smittenaar, Alexandra K Walker, Shaun McGill, Christiana Kartsonaki, Rupesh J Robinson-Vyas, Janette P McQuillan, Sarah Christie, Leslie Harris, Jonathan Lawson, Elizabeth Henderson and 6 more

Abstract read
In one paragraph

Article in British journal of cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. MRE11 as a Predictive Biomarker of Outcome After Radiation Therapy in Bladder Cancer.International journal of radiation oncology, biology, physics · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Peter SmittenaarCancer Research UK, London, EC1V 4AD, UK.
Alexandra K WalkerCancer Research UK/MRC Oxford Institute for Radiation Oncology, University of Oxford, Oxford, OX3 7DQ, UK.
Shaun McGillCancer Research UK/MRC Oxford Institute for Radiation Oncology, University of Oxford, Oxford, OX3 7DQ, UK.
Christiana KartsonakiDepartment of Population Health, University of Oxford, Oxford, OX3 7LF, UK.
Rupesh J Robinson-VyasCancer Research UK, London, EC1V 4AD, UK.
Janette P McQuillanCancer Research UK, London, EC1V 4AD, UK.
Sarah ChristieCancer Research UK, London, EC1V 4AD, UK.
Leslie HarrisCancer Research UK, London, EC1V 4AD, UK.
Jonathan LawsonCancer Research UK, London, EC1V 4AD, UK.
Elizabeth HendersonCancer Research UK/MRC Oxford Institute for Radiation Oncology, University of Oxford, Oxford, OX3 7DQ, UK.
Will HowatCancer Research UK Cambridge Institute, University of Cambridge, Cambridge, CB2 ORE, UK.
Andrew HanbyLeeds Institute of Cancer and Pathology (LICAP), St James's University Hospital, Leeds, LS9 7TF, UK.
Gareth J ThomasCancer Sciences Unit, University of Southampton Faculty of Medicine, Southampton, SO16 6YD, UK.
Selina BhattaraiLeeds Teaching Hospitals NHS Trust, St James's Hospital, Leeds, LS7 9TF, UK.
Lisa BrowningDepartment of Cellular Pathology, John Radcliffe Hospital, Oxford, OX3 9DU, UK.
Anne E KiltieCancer Research UK/MRC Oxford Institute for Radiation Oncology, University of Oxford, Oxford, OX3 7DQ, UK. anne.kiltie@oncology.ox.ac.uk.ORCID http://orcid.org/0000-0001-7208-2912

Funding

Cancer Research UK 23279Cancer Research UK C5255/A15935Medical Research Council MR/K501256/1
6 · The paper itself

Abstract

backgroundImmunohistochemistry (IHC) is often used in personalisation of cancer treatments. Analysis of large data sets to uncover predictive biomarkers by specialists can be enormously time-consuming. Here we investigated crowdsourcing as a means of reliably analysing immunostained cancer samples to discover biomarkers predictive of cancer survival.

methodsWe crowdsourced the analysis of bladder cancer TMA core samples through the smartphone app 'Reverse the Odds'. Scores from members of the public were pooled and compared to a gold standard set scored by appropriate specialists. We also used crowdsourced scores to assess associations with disease-specific survival.

resultsData were collected over 721 days, with 4,744,339 classifications performed. The average time per classification was approximately 15 s, with approximately 20,000 h total non-gaming time contributed. The correlation between crowdsourced and expert H-scores (staining intensity × proportion) varied from 0.65 to 0.92 across the markers tested, with six of 10 correlation coefficients at least 0.80. At least two markers (MRE11 and CK20) were significantly associated with survival in patients with bladder cancer, and a further three markers showed results warranting expert follow-up.

conclusionsCrowdsourcing through a smartphone app has the potential to accurately screen IHC data and greatly increase the speed of biomarker discovery.

Indexed as

Cell PhoneCrowdsourcingBiomarkers, TumorFemaleHumansImmunohistochemistryKeratin-20MaleMiddle AgedMRE11 Homologue ProteinUrinary Bladder NeoplasmsBiomarkers, TumorKeratin-20KRT20 protein, humanMRE11 Homologue ProteinMRE11 protein, human

Identifiers

PMID29991697
PMCPMC6048059

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.