Evidence map›Paper›PMID 29990689›Full record

ArticleMedical image analysis2018

A cortical shape-adaptive approach to local gyrification index.

Ilwoo Lyu, Sun Hyung Kim, Jessica B Girault, John H Gilmore, Martin A Styner

Abstract read
In one paragraph

Article in Medical image analysis, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
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  6. Curvature analysis of perisylvian epilepsy.Acta neurologica Belgica · 2023
    Article
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  15. Validation of Group-wise Registration for Surface-based Functional MRI Analysis.Proceedings of SPIE--the International Society for Optical Engineering · 2021
    Article
  16. Article
  17. Joint analysis of structural connectivity and cortical surface features: correlates with mild traumatic brain injury.Proceedings of SPIE--the International Society for Optical Engineering · 2021
    Article
  18. Joint cortical surface and structural connectivity analysis of Alzheimer's Disease.Proceedings of SPIE--the International Society for Optical Engineering · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ilwoo LyuDepartment of Computer Science, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA. Electronic address: ilwoolyu@cs.unc.edu.
Sun Hyung KimDepartment of Psychiatry, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Jessica B GiraultDepartment of Psychiatry, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
John H GilmoreDepartment of Psychiatry, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Martin A StynerDepartment of Computer Science, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA; Department of Psychiatry, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.

Funding

UNC MRDD Research CenterP30HD003110 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BELGER, AYSENIL · 1985 to 2012
$28.7M
Prospective study of the onset of schizophreniaP50MH064065 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GILMORE, JOHN HORACE · 2002 to 2011
$19.6M
Preclinical CoreU54HD079124 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI PIVEN, JOSEPH · 2013 to 2019
$8.0M
Early Brain Development in TwinsR01MH070890 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GILMORE, JOHN HORACE · 2004 to 2014
$5.3M
Early Brain Development in One and Two Year OldsR01HD053000 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GILMORE, JOHN HORACE · 2007 to 2018
$4.4M
Early Brain Development in TwinsU01MH070890 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GILMORE, JOHN HORACE · 2015 to 2019
$2.9M
NICHD NIH HHS P30 HD003110NICHD NIH HHS R01 HD053000NICHD NIH HHS U54 HD079124NIMH NIH HHS P50 MH064065NIMH NIH HHS R01 MH070890NIMH NIH HHS U01 MH070890
6 · The paper itself

Abstract

The amount of cortical folding, or gyrification, is typically measured within local cortical regions covered by an equidistant geodesic or nearest neighborhood-ring kernel. However, without careful design, such a kernel can easily cover multiple sulcal and gyral regions that may not be functionally related. Furthermore, this can result in smoothing out details of cortical folding, which consequently blurs local gyrification measurements. In this paper, we propose a novel kernel shape to locally quantify cortical gyrification within sulcal and gyral regions. We adapt wavefront propagation to generate a spatially varying kernel shape that encodes cortical folding patterns: neighboring gyral crowns, sulcal fundi, and sulcal banks. For this purpose, we perform anisotropic wavefront propagation that runs fast along gyral crowns and sulcal fundi by solving a static Hamilton-Jacobi partial differential equation. The resulting kernel adaptively elongates along gyral crowns and sulcal fundi, while keeping a uniform shape over flat regions like sulcal banks. We then measure local gyrification within the proposed spatially varying kernel. The experimental results show that the proposed kernel-based gyrification measure achieves a higher reproducibility than the conventional method in a multi-scan dataset. We further apply the proposed kernel to a brain development study in the early postnatal phase from neonate to 2 years of age. In this study we find that our kernel yields both positive and negative associations of gyrification with age, whereas the conventional method only captures positive associations. In general, our method yields sharper and more detailed statistical maps that associate cortical folding with sex and gestational age.

Indexed as

Cerebral CortexHealthy VolunteersHumansImage EnhancementImage Processing, Computer-AssistedMagnetic Resonance ImagingPhantoms, ImagingReproducibility of ResultsAdaptive kernelEarly brain development studyLocal gyrification indexStatic Hamilton–Jacobi partial differential equationSulcal and gyral curvesWavefront propagation

Identifiers

PMID29990689
PMCPMC6167255

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.