Evidence map›Paper›PMID 29989595›Full record

ArticleScientific data2018

Transcriptome sequencing and molecular markers discovery in the gonads of Portunus sanguinolentus.

Yin Zhang, Guidong Miao, Qingyang Wu, Fan Lin, Cuihong You, Shuqi Wang, Jude Juventus Aweya, Hongyu Ma

Abstract readDataset
In one paragraph

Article in Scientific data, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Identification of Sex-Related Genes from the Three-Spot Swimming CrabAnimals : an open access journal from MDPI · 2021
    Article
  4. Microorganisms · 2021
    Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yin ZhangGuangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou 515063, China.
Guidong MiaoGuangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou 515063, China.
Qingyang WuGuangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou 515063, China.
Fan LinGuangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou 515063, China.
Cuihong YouGuangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou 515063, China.
Shuqi WangGuangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou 515063, China.
Jude Juventus AweyaGuangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou 515063, China.
Hongyu MaGuangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou 515063, China.ORCID 0000-0003-2299-503X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Crab culture has gained prominence in the last decade due to the large global market demand for live crabs and crab products. Portunus sanguinolentus is one of the economically important crab species in the Indo-Pacific region, with distinct differences in growth and size between male and female crabs, thus, leading to huge difference in their market values. The culture of P. sanguinolentus is still in its infancy, with crab supplies heavily dependent on wild catch. In order to unravel the molecular differences between male and female crabs, we generated a comprehensive transcriptomic dataset for P. sanguinolentus by sequencing the gonads of both sexes using the Illumina Hiseq 2500 system. Transcriptomes were assembled using Trinity de novo assembly followed by annotation. This transcriptomic data set for P. sanguinolentus would serve as an important reference data for genomic and genetic studies in this crab and related species.

Indexed as

GonadsTranscriptomeAnimalsBiomarkersBrachyuraFemaleGenomicsMaleBiomarkers

Identifiers

PMID29989595
PMCPMC6038849

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.