Evidence map›Paper›PMID 29988067›Full record

ArticleNature chemical biology2018

Noncanonical translation via deadenylated 3' UTRs maintains primordial germ cells.

Youngnam N Jin, Peter J Schlueter, Nathalie Jurisch-Yaksi, Pui-Ying Lam, Shan Jin, Woong Y Hwang, Jing-Ruey Joanna Yeh, Masaaki Yoshigi, Shao-En Ong, Monica Schenone and 3 more

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Versatile CRISPR-Cas Tools for Gene Regulation in Zebrafish via an Enhanced Q Binary System.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Article
  3. Review
  4. Chemical Genetics: Manipulating the Germline with Small Molecules.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  5. Article
  6. PAINTing translation.Nature chemical biology · 2018
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Youngnam N JinCardiovascular Research Center, Massachusetts General Hospital, Charlestown, MA, USA. youngnam.jin@pharm.utah.edu.
Peter J SchlueterCardiovascular Research Center, Massachusetts General Hospital, Charlestown, MA, USA.
Nathalie Jurisch-YaksiCardiovascular Research Center, Massachusetts General Hospital, Charlestown, MA, USA.ORCID http://orcid.org/0000-0002-8767-6120
Pui-Ying LamCardiovascular Research Center, Massachusetts General Hospital, Charlestown, MA, USA.ORCID http://orcid.org/0000-0002-6319-5752
Shan JinCardiovascular Research Center, Massachusetts General Hospital, Charlestown, MA, USA.
Woong Y HwangCardiovascular Research Center, Massachusetts General Hospital, Charlestown, MA, USA.
Jing-Ruey Joanna YehCardiovascular Research Center, Massachusetts General Hospital, Charlestown, MA, USA.
Masaaki YoshigiDepartment of Pediatrics, University of Utah, Salt Lake City, UT, USA.
Shao-En OngBroad Institute, Cambridge, MA, USA.
Monica SchenoneBroad Institute, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-6456-8768
Christina R HartiganBroad Institute, Cambridge, MA, USA.
Steven A CarrBroad Institute, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-7203-4299
Randall T PetersonCardiovascular Research Center, Massachusetts General Hospital, Charlestown, MA, USA. randall.peterson@pharm.utah.edu.
Broad Institute · USHarvard University · USMassachusetts General Hospital · USUniversity of Utah · US

Funding

MULTIDISCIPLINARY RESEARCH TRAINING IN CARDIOLOGYT32HL007208 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI Patrick Thomas Ellinor, David E Sosnovik · 1985 to 2026
$16.1M
ADVANCING ZINC FINGER NUCLEASES FOR TARGETED GENOME MANIPULATIONR01GM088040 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI JOUNG, J. KEITH, PETERSON, RANDALL T · 2009 to 2016
$4.5M
NHLBI NIH HHS T32 HL007208NIGMS NIH HHS R01 GM088040
6 · The paper itself

Abstract

Primordial germ cells (PGCs) form during early embryogenesis with a supply of maternal mRNAs that contain shorter poly(A) tails. How translation of maternal mRNAs is regulated during PGC development remains elusive. Here we describe a small-molecule screen with zebrafish embryos that identified primordazine, a compound that selectively ablates PGCs. Primordazine's effect on PGCs arises from translation repression through primordazine-response elements in the 3' UTRs. Systematic dissection of primordazine's mechanism of action revealed that translation of mRNAs during early embryogenesis occurs by two distinct pathways, depending on the length of their poly(A) tails. In addition to poly(A)-tail-dependent translation (PAT), early embryos perform poly(A)-tail-independent noncanonical translation (PAINT) via deadenylated 3' UTRs. Primordazine inhibits PAINT without inhibiting PAT, an effect that was also observed in quiescent, but not proliferating, mammalian cells. These studies reveal that PAINT is an alternative form of translation in the early embryo and is indispensable for PGC maintenance.

Indexed as

3' Untranslated RegionsAnimalsCell Line, TumorGerm CellsHydrazinesMicePeptide Chain Initiation, TranslationalZebrafish3' Untranslated RegionsHydrazines

Identifiers

PMID29988067
PMCPMC6800240
OpenAlexW2881356922

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.