Evidence map›Paper›PMID 29988048›Full record

ArticleNature microbiology2018

African trypanosomes evade immune clearance by O-glycosylation of the VSG surface coat.

Jason Pinger, Dragana Nešić, Liaqat Ali, Francisco Aresta-Branco, Mirjana Lilic, Shanin Chowdhury, Hee-Sook Kim, Joseph Verdi, Jayne Raper, Michael A J Ferguson and 2 more

Open access · greenAbstract read
In one paragraph

Article in Nature microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 68 citations in OpenAlex.

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  8. Evasive mechanisms of human VSG and PfEMP1 antigens with link to Vaccine scenario: a review.Journal of parasitic diseases : official organ of the Indian Society for Parasitology · 2025
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Jason PingerThe Rockefeller University, Laboratory of Lymphocyte Biology, New York, NY, USA.
Dragana NešićThe Rockefeller University, Laboratory of Structural Microbiology, New York, NY, USA.
Liaqat AliWellcome Centre for Anti-Infectives Research, School of Life Sciences, University of Dundee, Dundee, UK.
Francisco Aresta-BrancoDivision of Immune Diversity, German Cancer Research Center, Heidelberg, Germany.
Mirjana LilicThe Rockefeller University, Laboratory of Structural Microbiology, New York, NY, USA.
Shanin ChowdhuryThe Rockefeller University, Laboratory of Lymphocyte Biology, New York, NY, USA.
Hee-Sook KimThe Rockefeller University, Laboratory of Lymphocyte Biology, New York, NY, USA.
Joseph VerdiDepartment of Biological Sciences, Hunter College, City University of New York, New York, NY, USA.
Jayne RaperDepartment of Biological Sciences, Hunter College, City University of New York, New York, NY, USA.
Michael A J FergusonWellcome Centre for Anti-Infectives Research, School of Life Sciences, University of Dundee, Dundee, UK. m.a.j.ferguson@dundee.ac.uk.ORCID http://orcid.org/0000-0003-1321-8714
F Nina PapavasiliouDivision of Immune Diversity, German Cancer Research Center, Heidelberg, Germany. n.papavasiliou@dkfz-heidelberg.de.ORCID http://orcid.org/0000-0002-5971-7909
C Erec StebbinsDivision of Structural Biology of Infection and Immunity, German Cancer Research Center, Heidelberg, Germany. e.stebbins@dkfz-heidelberg.de.ORCID http://orcid.org/0000-0001-6229-5308
Rockefeller University · USGerman Cancer Research Center · DECity University of New York · USUniversity of Dundee · GB

Funding

Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Parameters that govern initiation of VSG switching in T.bruceiR01AI085973 · NIAID · ROCKEFELLER UNIVERSITY · PI PAPAVASILIOU, F. NINA · 2010 to 2014
$2.1M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
NCRR NIH HHS S10 RR029205NIAID NIH HHS R01 AI085973NIGMS NIH HHS P41 GM103403Wellcome Trust
6 · The paper itself

Abstract

The African trypanosome Trypanosoma brucei spp. is a paradigm for antigenic variation, the orchestrated alteration of cell surface molecules to evade host immunity. The parasite elicits robust antibody-mediated immune responses to its variant surface glycoprotein (VSG) coat, but evades immune clearance by repeatedly accessing a large genetic VSG repertoire and 'switching' to antigenically distinct VSGs. This persistent immune evasion has been ascribed exclusively to amino-acid variance on the VSG surface presented by a conserved underlying protein architecture. We establish here that this model does not account for the scope of VSG structural and biochemical diversity. The 1.4-Å-resolution crystal structure of the variant VSG3 manifests divergence in the tertiary fold and oligomeric state. The structure also reveals an O-linked carbohydrate on the top surface of VSG3. Mass spectrometric analysis indicates that this O-glycosylation site is heterogeneously occupied in VSG3 by zero to three hexose residues and is also present in other VSGs. We demonstrate that this O-glycosylation increases parasite virulence by impairing the generation of protective immunity. These data alter the paradigm of antigenic variation by the African trypanosome, expanding VSG variability beyond amino-acid sequence to include surface post-translational modifications with immunomodulatory impact.

Indexed as

Antibodies, ProtozoanBinding SitesCrystallography, X-RayGenetic VariationGlycosylationModels, MolecularProtein ConformationProtein DomainsTrypanosoma brucei bruceiVariant Surface Glycoproteins, TrypanosomaAntibodies, ProtozoanVariant Surface Glycoproteins, Trypanosoma

Identifiers

PMID29988048
PMCPMC6108419
OpenAlexW2873994807

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.