Evidence map›Paper›PMID 29987902›Full record

ArticleCancer science2018

Identification of ENTPD8 and cytidine in pancreatic cancer by metabolomic and transcriptomic conjoint analysis.

Yong An, Huihua Cai, Yong Yang, Yue Zhang, Shengyong Liu, Xinquan Wu, Yunfei Duan, Donglin Sun, Xuemin Chen

Open access · goldAbstract read
In one paragraph

Article in Cancer science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

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  6. Effects ofFrontiers in microbiology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Yong AnDepartment of Hepato-Pancreato-Biliary Surgery, Third Affiliated Hospital of Soochow University, Changzhou, Jiangsu, China.
Huihua CaiDepartment of Hepato-Pancreato-Biliary Surgery, Third Affiliated Hospital of Soochow University, Changzhou, Jiangsu, China.
Yong YangDepartment of Hepato-Pancreato-Biliary Surgery, Third Affiliated Hospital of Soochow University, Changzhou, Jiangsu, China.
Yue ZhangDepartment of Hepato-Pancreato-Biliary Surgery, Third Affiliated Hospital of Soochow University, Changzhou, Jiangsu, China.
Shengyong LiuDepartment of Hepato-Pancreato-Biliary Surgery, Third Affiliated Hospital of Soochow University, Changzhou, Jiangsu, China.
Xinquan WuDepartment of Hepato-Pancreato-Biliary Surgery, Third Affiliated Hospital of Soochow University, Changzhou, Jiangsu, China.
Yunfei DuanDepartment of Hepato-Pancreato-Biliary Surgery, Third Affiliated Hospital of Soochow University, Changzhou, Jiangsu, China.
Donglin SunDepartment of Hepato-Pancreato-Biliary Surgery, Third Affiliated Hospital of Soochow University, Changzhou, Jiangsu, China.
Xuemin ChenDepartment of Hepato-Pancreato-Biliary Surgery, Third Affiliated Hospital of Soochow University, Changzhou, Jiangsu, China.ORCID http://orcid.org/0000-0002-1091-512X
Soochow University · CN

Funding

National Natural Science Foundation of China 81502002Natural Science Foundation of Jiangsu Province BK20150254
6 · The paper itself

Abstract

To identify metabolic pathways that were perturbed in pancreatic cancer (PC), we investigated gene-metabolite networks by integration of metabolomic and transcriptomic. In this research, we undertook the metabolomic study of 43 paired human PC samples, aiming to identify key metabolic alterations in PC. We also carried out in vitro experiments to validate that the key metabolite cytidine and its related gene ENTPD8 played an important role in PC cell proliferation. We screened out 13 metabolites differentially expressed in PC tissue (PCT) by liquid chromatography/mass spectrometry analysis on 34 metabolites, and the partial least square discrimination analysis results revealed that 9 metabolites among them were remarkably altered in PCT compared to adjacent noncancerous tissue (variable importance in projection >1, P < .05). Among the 9 metabolites, 7 might be potential biomarkers. The most significantly enriched metabolic pathway was pyrimidine metabolism. We analyzed 351 differentially expressed genes from The Cancer Genome Atlas and intersected them with Kyoto Encyclopedia of Genes and Genomes metabolic pathways. We found that ENTPD8 had a gene-metabolite association with cytidine in the CTP dephosphorylation pathway. We verified by in vitro experiments that the CTP dephosphorylation pathway was changed in PCT compared with adjacent noncancerous tissue. ENTPD8 was downregulated in PCT, causing a reduction in cytidine formation and hence weakened CTP dephosphorylation in pyrimidine metabolism.

Indexed as

Adenosine TriphosphatasesAdultAgedAged, 80 and overCell Line, TumorCytidineFemaleGene Expression ProfilingHumansMaleMetabolomicsMiddle AgedPancreatic NeoplasmsAdenosine TriphosphatasesCytidinenucleoside triphosphate diphosphohydrolase 8, humanmetabolic pathwaymetabolitemetabolomicpancreatic cancertranscriptomic

Identifiers

PMID29987902
PMCPMC6125470
OpenAlexW2868323719

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.