Evidence map›Paper›PMID 29987018›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Preordering of water is not needed for ice recognition by hyperactive antifreeze proteins.

Arpa Hudait, Daniel R Moberg, Yuqing Qiu, Nathan Odendahl, Francesco Paesani, Valeria Molinero

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
10.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 118 citations in OpenAlex.

  1. An Ultrapotent, Ultraeconomical, Antifreeze Polypeptide.Advanced materials (Deerfield Beach, Fla.) · 2026
    Article
  2. Article
  3. On the engulfment of antifreeze proteins by ice.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. Multiscale Molecular Dynamics Simulations of Ice-Binding Proteins.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  6. Article
  7. De novo designed ice-binding proteins from twist-constrained helices.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Ice-binding proteins and the applicability and limitations of the kinetic pinning model.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2019
    Article
  18. Combined molecular dynamics and neural network method for predicting protein antifreeze activity.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  19. Antifreeze protein hydration waters: Unstructured unless bound to ice.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Arpa HudaitDepartment of Chemistry, The University of Utah, Salt Lake City, UT 84112-0850.
Daniel R MobergDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093-0314.ORCID 0000-0002-4240-6098
Yuqing QiuDepartment of Chemistry, The University of Utah, Salt Lake City, UT 84112-0850.
Nathan OdendahlDepartment of Chemistry, The University of Utah, Salt Lake City, UT 84112-0850.
Francesco PaesaniDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093-0314 fpaesani@ucsd.edu valeria.molinero@utah.edu.
Valeria MolineroDepartment of Chemistry, The University of Utah, Salt Lake City, UT 84112-0850; fpaesani@ucsd.edu valeria.molinero@utah.edu.
University of Utah · USUniversity of California San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antifreeze proteins (AFPs) inhibit ice growth in organisms living in cold environments. Hyperactive insect AFPs are particularly effective, binding ice through "anchored clathrate" motifs. It has been hypothesized that the binding of hyperactive AFPs to ice is facilitated by preordering of water at the ice-binding site (IBS) of the protein in solution. The antifreeze protein

Indexed as

IceAntifreeze ProteinsBinding SitesSpectrophotometry, InfraredSpectrum Analysis, RamanWaterAntifreeze ProteinsIceWaterantifreeze proteiniceinterfacial watermolecular recognitionvibrational spectroscopy

Identifiers

PMID29987018
PMCPMC6099916
OpenAlexW2820141969

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.