Evidence map›Paper›PMID 29985961›Full record

ArticlePLoS genetics2018

GROWTH-REGULATING FACTOR 9 negatively regulates arabidopsis leaf growth by controlling ORG3 and restricting cell proliferation in leaf primordia.

Mohammad Amin Omidbakhshfard, Ushio Fujikura, Justyna Jadwiga Olas, Gang-Ping Xue, Salma Balazadeh, Bernd Mueller-Roeber

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 1 pooled it
13.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 1 synthesis or guideline pooled it, 125 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Genome-Wide Analysis of the GRF-GIF Module inInternational journal of molecular sciences · 2026
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  9. The WRC domain of GRF transcription factors: Structure and DNA recognition.Protein science : a publication of the Protein Society · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Mohammad Amin OmidbakhshfardUniversity of Potsdam, Institute of Biochemistry and Biology, Potsdam-Golm, Germany.
Ushio FujikuraUniversity of Potsdam, Institute of Biochemistry and Biology, Potsdam-Golm, Germany.
Justyna Jadwiga OlasUniversity of Potsdam, Institute of Biochemistry and Biology, Potsdam-Golm, Germany.
Gang-Ping XueCSIRO Plant Industry, St. Lucia, Australia.
Salma BalazadehUniversity of Potsdam, Institute of Biochemistry and Biology, Potsdam-Golm, Germany.ORCID 0000-0002-5789-4071
Bernd Mueller-RoeberUniversity of Potsdam, Institute of Biochemistry and Biology, Potsdam-Golm, Germany.ORCID 0000-0002-1410-464X
University of Potsdam · DECommonwealth Scientific and Industrial Research Organisation · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leaf growth is a complex process that involves the action of diverse transcription factors (TFs) and their downstream gene regulatory networks. In this study, we focus on the functional characterization of the Arabidopsis thaliana TF GROWTH-REGULATING FACTOR9 (GRF9) and demonstrate that it exerts its negative effect on leaf growth by activating expression of the bZIP TF OBP3-RESPONSIVE GENE 3 (ORG3). While grf9 knockout mutants produce bigger incipient leaf primordia at the shoot apex, rosette leaves and petals than the wild type, the sizes of those organs are reduced in plants overexpressing GRF9 (GRF9ox). Cell measurements demonstrate that changes in leaf size result from alterations in cell numbers rather than cell sizes. Kinematic analysis and 5-ethynyl-2'-deoxyuridine (EdU) incorporation assay revealed that GRF9 restricts cell proliferation in the early developing leaf. Performing in vitro binding site selection, we identified the 6-base motif 5'-CTGACA-3' as the core binding site of GRF9. By global transcriptome profiling, electrophoretic mobility shift assay (EMSA) and chromatin immunoprecipitation (ChIP) we identified ORG3 as a direct downstream, and positively regulated target of GRF9. Genetic analysis of grf9 org3 and GRF9ox org3 double mutants reveals that both transcription factors act in a regulatory cascade to control the final leaf dimensions by restricting cell number in the developing leaf.

Indexed as

14-3-3 ProteinsArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsBinding SitesCell ProliferationGene Expression ProfilingGene Expression Regulation, PlantGene Knockout TechniquesGene Regulatory NetworksPlant LeavesPlants, Genetically ModifiedProtein Binding14-3-3 ProteinsArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsbHLH39 protein, ArabidopsisGRF9 protein, Arabidopsis

Identifiers

PMID29985961
PMCPMC6053248
OpenAlexW2830007178

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.