Evidence map›Paper›PMID 29984156›Full record

ArticleNeuroImage. Clinical2018

Classification of multi-site MR images in the presence of heterogeneity using multi-task learning.

Qiongmin Ma, Tianhao Zhang, Marcus V Zanetti, Hui Shen, Theodore D Satterthwaite, Daniel H Wolf, Raquel E Gur, Yong Fan, Dewen Hu, Geraldo F Busatto and 1 more

Abstract read
In one paragraph

Article in NeuroImage. Clinical, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Metadata Normalization.Proceedings. IEEE Computer Society Conference on Computer Vision and Pattern Recognition · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Standardized Brain MRI Acquisition Protocols Improve Statistical Power in Multicenter Quantitative Morphometry Studies.Journal of neuroimaging : official journal of the American Society of Neuroimaging · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Qiongmin MaCollege of Mechatronics and Automation, National University of Defense Technology, Changsha, Hunan 410073, China; Center for Biomedical Image Computing and Analytics, and Department of Radiology, University of Pennsylvania, Philadelphia, PA 19104, United States; Beijing Institute of System Engineering, China. Electronic address: qiongmin.ma@nudt.edu.cn.
Tianhao ZhangCenter for Biomedical Image Computing and Analytics, and Department of Radiology, University of Pennsylvania, Philadelphia, PA 19104, United States.
Marcus V ZanettiLaboratory of Psychiatric Neuroimaging (LIM-21), Department and Institute of Psychiatry, Faculty of Medicine, University of São Paulo, São Paulo, Brazil.
Hui ShenCollege of Mechatronics and Automation, National University of Defense Technology, Changsha, Hunan 410073, China.
Theodore D SatterthwaiteDepartment of Psychiatry, University of Pennsylvania, Philadelphia, PA 19104, United States.
Daniel H WolfDepartment of Psychiatry, University of Pennsylvania, Philadelphia, PA 19104, United States.
Raquel E GurDepartment of Psychiatry, University of Pennsylvania, Philadelphia, PA 19104, United States.
Yong FanCenter for Biomedical Image Computing and Analytics, and Department of Radiology, University of Pennsylvania, Philadelphia, PA 19104, United States.
Dewen HuCollege of Mechatronics and Automation, National University of Defense Technology, Changsha, Hunan 410073, China.
Geraldo F BusattoLaboratory of Psychiatric Neuroimaging (LIM-21), Department and Institute of Psychiatry, Faculty of Medicine, University of São Paulo, São Paulo, Brazil.
Christos DavatzikosCenter for Biomedical Image Computing and Analytics, and Department of Radiology, University of Pennsylvania, Philadelphia, PA 19104, United States.

Funding

Personalized Functional Network Modeling to Characterize and Predict Psychopathology in YouthR01EB022573 · NIBIB · UNIVERSITY OF PENNSYLVANIA · PI Yong Fan, Theodore Satterthwaite · 2016 to 2026
$6.0M
Mapping Heterogeneity of Neuroanatomical Imaging Signatures of Psychosis via Pattern AnalysisR01MH112070 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI DAVATZIKOS, CHRISTOS · 2017 to 2020
$2.7M
Quantitative Behavioral and Imaging Phenotypes of Amotivation in SchizophreniaR01MH101111 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI WOLF, DANIEL H · 2013 to 2016
$1.6M
Functional neuroimaging of reward and motivation deficits in schizophreniaK23MH085096 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI WOLF, DANIEL H · 2009 to 2013
$897k
NIBIB NIH HHS R01 EB022573NIMH NIH HHS K23 MH085096NIMH NIH HHS R01 MH101111NIMH NIH HHS R01 MH112070
6 · The paper itself

Abstract

With the advent of Big Data Imaging Analytics applied to neuroimaging, datasets from multiple sites need to be pooled into larger samples. However, heterogeneity across different scanners, protocols and populations, renders the task of finding underlying disease signatures challenging. The current work investigates the value of multi-task learning in finding disease signatures that generalize across studies and populations. Herein, we present a multi-task learning type of formulation, in which different tasks are from different studies and populations being pooled together. We test this approach in an MRI study of the neuroanatomy of schizophrenia (SCZ) by pooling data from 3 different sites and populations: Philadelphia, Sao Paulo and Tianjin (50 controls and 50 patients from each site), which posed integration challenges due to variability in disease chronicity, treatment exposure, and data collection. Some existing methods are also tested for comparison purposes. Experiments show that classification accuracy of multi-site data outperformed that of single-site data and pooled data using multi-task feature learning, and also outperformed other comparison methods. Several anatomical regions were identified to be common discriminant features across sites. These included prefrontal, superior temporal, insular, anterior cingulate cortex, temporo-limbic and striatal regions consistently implicated in the pathophysiology of schizophrenia, as well as the cerebellum, precuneus, and fusiform, middle temporal, inferior parietal, postcentral, angular, lingual and middle occipital gyri. These results indicate that the proposed multi-task learning method is robust in finding consistent and reliable structural brain abnormalities associated with SCZ across different sites, in the presence of multiple sources of heterogeneity.

Indexed as

Brain MappingMagnetic Resonance ImagingAdolescentAdultAgedAlzheimer DiseaseBrainFemaleHumansLearningMaleMiddle AgedNeuroimagingSchizophreniaYoung AdultImaging heterogeneityMRIMulti-site classificationMulti-task learningSchizophreniaSparsity

Identifiers

PMID29984156
PMCPMC6029565

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.