Evidence map›Paper›PMID 29980615›Full record

ArticleMolecular & cellular proteomics : MCP2018

Influenza A Virus Induces Autophagosomal Targeting of Ribosomal Proteins.

Andrea C Becker, Monique Gannagé, Sebastian Giese, Zehan Hu, Shadi Abou-Eid, Carole Roubaty, Petra Paul, Lea Bühler, Christine Gretzmeier, Veronica I Dumit and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. The ribosomal landscape in influenza A virus infection: from molecular mechanisms to clinical relevance.European respiratory review : an official journal of the European Respiratory Society · 2026
    Review
  3. Article
  4. Isotope Labeling Techniques for Virus-Infected Cells.Methods in molecular biology (Clifton, N.J.) · 2025
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Frontiers in cellular and infection microbiology · 2022
    Article
  11. Article
  12. The Crossroads between Host Copper Metabolism and Influenza Infection.International journal of molecular sciences · 2021
    Review
  13. Review
  14. Subcellular proteomics.Nature reviews. Methods primers · 2021
    Article
  15. Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Andrea C BeckerFrom the ‡Department of Dermatology, Medical Center University of Freiburg, Hauptstr. 7, 79104 Freiburg, Germany.
Monique Gannagé¶Department of Pathology and Immunology, School of Medicine, University of Geneva, 1 rue Michel Servet, 1211 Geneva, Switzerland.
Sebastian Giese§Faculty of Medicine, University of Freiburg, Breisacher Strasse 153, 79110 Freiburg, Germany.
Zehan HuFrom the ‡Department of Dermatology, Medical Center University of Freiburg, Hauptstr. 7, 79104 Freiburg, Germany.
Shadi Abou-Eid§§Department of Biology, University of Fribourg, Chemin du Musée 10, 1700 Fribourg, Switzerland.
Carole Roubaty§§Department of Biology, University of Fribourg, Chemin du Musée 10, 1700 Fribourg, Switzerland.
Petra Paul**Viral Immunobiology, Institute of Experimental Immunology, University of Zurich, Winterthurerstrasse 190, 8057 Zürich, Switzerland.
Lea BühlerFrom the ‡Department of Dermatology, Medical Center University of Freiburg, Hauptstr. 7, 79104 Freiburg, Germany.
Christine GretzmeierFrom the ‡Department of Dermatology, Medical Center University of Freiburg, Hauptstr. 7, 79104 Freiburg, Germany.
Veronica I Dumit‡‡Core Facility Proteomics, Center for Biological Systems Analysis (ZBSA), University of Freiburg, Habsburgerstr. 49, 79104 Freiburg, Germany.
Stéphanie Kaeser-Pebernard§§Department of Biology, University of Fribourg, Chemin du Musée 10, 1700 Fribourg, Switzerland.
Martin Schwemmle§Faculty of Medicine, University of Freiburg, Breisacher Strasse 153, 79110 Freiburg, Germany.ORCID 0000-0002-2972-6855
Christian Münz**Viral Immunobiology, Institute of Experimental Immunology, University of Zurich, Winterthurerstrasse 190, 8057 Zürich, Switzerland.
Jörn DengjelFrom the ‡Department of Dermatology, Medical Center University of Freiburg, Hauptstr. 7, 79104 Freiburg, Germany; joern.dengjel@unifr.ch.ORCID 0000-0002-9453-4614
University of Freiburg · DEUniversity of Fribourg · CHUniversity of Zurich · CHUniversity of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Seasonal epidemics of influenza A virus are a major cause of severe illness and are of high socio-economic relevance. For the design of effective antiviral therapies, a detailed knowledge of pathways perturbed by virus infection is critical. We performed comprehensive expression and organellar proteomics experiments to study the cellular consequences of influenza A virus infection using three human epithelial cell lines derived from human lung carcinomas: A549, Calu-1 and NCI-H1299. As a common response, the type I interferon pathway was up-regulated upon infection. Interestingly, influenza A virus infection led to numerous cell line-specific responses affecting both protein abundance as well as subcellular localization. In A549 cells, the vesicular compartment appeared expanded after virus infection. The composition of autophagsomes was altered by targeting of ribosomes, viral mRNA and proteins to these double membrane vesicles. Thus, autophagy may support viral protein translation by promoting the clustering of the respective molecular machinery in autophagosomes in a cell line-dependent manner.

Indexed as

AutophagosomesAutophagyCell Line, TumorHumansInfluenza A virusInfluenza, HumanProteomeRibosomal ProteinsRibosomesRNA, MessengerRNA, ViralProteomeRibosomal ProteinsRNA, MessengerRNA, ViralautophagosomeAutophagyCell biologycell lineorganelleproteomicsRibosomesSILACvesicleViruses

Identifiers

PMID29980615
PMCPMC6166674
OpenAlexW2855951308

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.