Evidence map›Paper›PMID 29979690›Full record

ArticlePloS one2018

QTL analysis reveals quantitative resistant loci for Phytophthora infestans and Tecia solanivora in tetraploid potato (Solanum tuberosum L.).

Juan David Santa, Jhon Berdugo-Cely, Liliana Cely-Pardo, Mauricio Soto-Suárez, Teresa Mosquera, Carlos H Galeano M

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Journal of fungi (Basel, Switzerland) · 2021
    Review
  5. Article
  6. Article
  7. Synthetic Polyploidy in Grafted Crops.Frontiers in plant science · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Juan David SantaCorporación Colombiana de Investigación Agropecuaria (AGROSAVIA), C.I. Tibaitatá, Cundinamarca, Colombia.
Jhon Berdugo-CelyCorporación Colombiana de Investigación Agropecuaria (AGROSAVIA), C.I. Tibaitatá, Cundinamarca, Colombia.ORCID 0000-0003-4124-9243
Liliana Cely-PardoCorporación Colombiana de Investigación Agropecuaria (AGROSAVIA), C.I. Tibaitatá, Cundinamarca, Colombia.
Mauricio Soto-SuárezCorporación Colombiana de Investigación Agropecuaria (AGROSAVIA), C.I. Tibaitatá, Cundinamarca, Colombia.
Teresa MosqueraFaculty of Agricultural Sciences, Universidad Nacional de Colombia, sede Bogotá, Colombia.
Carlos H Galeano MCorporación Colombiana de Investigación Agropecuaria (AGROSAVIA), C.I. Palmira, Valle del Cauca, Colombia.ORCID 0000-0002-5801-2421

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Late blight and Guatemalan potato tuber moth caused by Phytophthora infestans and Tecia solanivora, respectively, are major phytosanitary problems on potato crops in Colombia and Ecuador. Hence, the development of resistant cultivars is an alternative for their control. However, breeding initiatives for durable resistance using molecular tools are limited due to the genome complexity and high heterozygosity in autotetraploid potatoes. To contribute to a better understanding of the genetic basis underlying the resistance to P. infestans and T. solanivora in potato, the aim of this study was to identify QTLs for resistance to P. infestans and T. solanivora using a F1 tetraploid potato segregant population for both traits. Ninety-four individuals comprised this population. Parent genotypes and their progeny were genotyped using SOLCAP 12K potato array. Forty-five percent of the markers were polymorphic. A genetic linkage map was built with a length of 968.4 cM and 1,287 SNPs showing good distribution across the genome. Severity and incidence were evaluated in two crop cycles for two years. QTL analysis revealed six QTLs linked to P. infestans, four of these related to previous QTLs reported, and two novel QTLs (qrAUDPC-3 and qrAUDPC-8). Fifteen QTLs were linked to T. solanivora, being qIPC-6 and qOPA-6.1, and qIPC-10 and qIPC-10.1 stable in two different trials. This study is one of the first to identify QTLs for T. solanivora. As the population employed is a breeding population, results will contribute significantly to breeding programs to select resistant plant material, especially in countries where P. infestans and T. solanivora limit potato production.

Indexed as

Quantitative Trait LociAnimalsChromosome MappingDisease ResistanceImmunity, InnateMothsPhenotypePhytophthora infestansPlant DiseasesPlant ProteinsPolymorphism, Single NucleotideSolanum tuberosumTetraploidyPlant Proteins

Identifiers

PMID29979690
PMCPMC6034811

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.