Evidence map›Paper›PMID 29977533›Full record

ArticleAntimicrobial resistance and infection control2018

Whole genome sequencing reveals high clonal diversity of

Tolbert Sonda, Happiness Kumburu, Marco van Zwetselaar, Michael Alifrangis, Blandina T Mmbaga, Frank M Aarestrup, Gibson Kibiki, Ole Lund

Open access · goldAbstract read
In one paragraph

Article in Antimicrobial resistance and infection control, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Observational
  7. Whole genome sequencing analysis of non-O157 Shiga toxin-producingIranian journal of veterinary research · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Genomic epidemiology ofMicrobial genomics · 2021
    Article
  16. Article
  17. Whole genome sequencing data ofData in brief · 2020
    Article
  18. Article
  19. Coexistence of TwoFrontiers in microbiology · 2020
    Article
  20. Molecular epidemiology of virulence and antimicrobial resistance determinants in Klebsiella pneumoniae from hospitalised patients in Kilimanjaro, Tanzania.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Tolbert Sonda1Kilimanjaro Clinical Research Institute, Kilimanjaro Christian Medical Centre, Moshi, Tanzania.
Happiness Kumburu1Kilimanjaro Clinical Research Institute, Kilimanjaro Christian Medical Centre, Moshi, Tanzania.
Marco van Zwetselaar1Kilimanjaro Clinical Research Institute, Kilimanjaro Christian Medical Centre, Moshi, Tanzania.
Michael AlifrangisCentre for Medical Parasitology, Department of Immunology and Microbiology, University of Copenhagen and Department of Infectious Diseases, Copenhagen University Hospital, Copenhagen, Denmark.
Blandina T Mmbaga1Kilimanjaro Clinical Research Institute, Kilimanjaro Christian Medical Centre, Moshi, Tanzania.
Frank M Aarestrup4DTU-Food, Technical University of Denmark, Copenhagen, Denmark.
Gibson Kibiki2Kilimanjaro Christian Medical University College, Moshi, Tanzania.
Ole Lund5Centre for Biological Sequence Analysis, Technical University of Denmark, Copenhagen, Denmark.
Kilimanjaro Christian Medical Centre · TZTechnical University of Denmark · DKCopenhagen University Hospital · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Limited information regarding the clonality of circulating Methods: Results: Out of 38 Conclusion: There is a high diversity of

Indexed as

Amoxicillin-Potassium Clavulanate CombinationAnti-Bacterial Agentsbeta-Lactamasesbeta-Lactam ResistanceCross-Sectional StudiesDrug Resistance, Multiple, BacterialEscherichia coliEscherichia coli InfectionsGenome, BacterialHospitalsHumansMicrobial Sensitivity TestsMultilocus Sequence TypingPhylogenyTanzaniaTertiary Care CentersAmoxicillin-Potassium Clavulanate CombinationAnti-Bacterial Agentsbeta-LactamasesTrimethoprim, Sulfamethoxazole Drug CombinationVirulence FactorsAnd virulenceE. coliMulti-locus sequence typingSerotypingTanzaniaWhole genome sequencing

Identifiers

PMID29977533
PMCPMC5992844
OpenAlexW2805076682

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.