Evidence map›Paper›PMID 29977079›Full record

ArticleScientific reports2018

Rbpj direct regulation of Atoh7 transcription in the embryonic mouse retina.

Joel B Miesfeld, Myung-Soon Moon, Amy N Riesenberg, Ashley N Contreras, Rhett A Kovall, Nadean L Brown

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Stroke-associated intergenic variants modulate a human FOXF2 transcriptional enhancer.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Retinal regeneration requires dynamic Notch signaling.Neural regeneration research · 2022
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. TheProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Recapitulating developmental mechanisms for retinal regeneration.Progress in retinal and eye research · 2020
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Joel B MiesfeldDepartment of Cell Biology & Human Anatomy, University of California Davis School of Medicine, One Shields Avenue, Davis, CA, 95616, USA.
Myung-Soon MoonDepartment of Cell Biology & Human Anatomy, University of California Davis School of Medicine, One Shields Avenue, Davis, CA, 95616, USA.
Amy N RiesenbergDivision of Developmental Biology, Cincinnati Children's Hospital Research Foundation, 3333 Burnet Avenue, Cincinnati, OH, 45229, USA.
Ashley N ContrerasDepartment of Molecular Genetics, Biochemistry and Microbiology, University of Cincinnati School of Medicine, Cincinnati, OH, 45267, USA.
Rhett A KovallDepartment of Molecular Genetics, Biochemistry and Microbiology, University of Cincinnati School of Medicine, Cincinnati, OH, 45267, USA.
Nadean L BrownDepartment of Cell Biology & Human Anatomy, University of California Davis School of Medicine, One Shields Avenue, Davis, CA, 95616, USA. nlbrown@ucdavis.edu.ORCID 0000-0002-4906-4625
Cincinnati Children's Hospital Medical Center · USUniversity of Cincinnati · USUniversity of California, Davis · US

Funding

ENVIRONMETAL CARCINOGENESIS AND MUTAGENESIST32ES007250 · NIEHS · UNIVERSITY OF CINCINNATI · PI MILLER, WILLIAM E · 1988 to 2024
$11.9M
INVESTIGATION OF MAMMALIAN RETINAL NEURON DEVELOPMENTR01EY013612 · NEI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BROWN, NADEAN L · 2001 to 2020
$6.0M
Vision Science Training Program: Cornea to CortexT32EY015387 · NEI · UNIVERSITY OF CALIFORNIA DAVIS · PI MARIE E BURNS · 2003 to 2026
$4.8M
Molecular mechanisms of transcriptional regulation in the Notch pathwayR01CA178974 · NCI · UNIVERSITY OF CINCINNATI · PI KOVALL, RHETT ALLEN · 2013 to 2017
$1.6M
NCI NIH HHS R01 CA178974NEI NIH HHS R01 EY013612NEI NIH HHS T32 EY015387NIEHS NIH HHS T32 ES007250
6 · The paper itself

Abstract

In vertebrate retinal progenitor cells, the proneural factor Atoh7 exhibits a dynamic tissue and cellular expression pattern. Although the resulting Atoh7 retinal lineage contains all seven major cell types, only retinal ganglion cells require Atoh7 for proper differentiation. Such specificity necessitates complex regulation of Atoh7 transcription during retina development. The Notch signaling pathway is an evolutionarily conserved suppressor of proneural bHLH factor expression. Previous in vivo mouse genetic studies established the cell autonomous suppression of Atoh7 transcription by Notch1, Rbpj and Hes1. Here we identify four CSL binding sites within the Atoh7 proximal regulatory region and demonstrate Rbpj protein interaction at these sequences by in vitro electromobility shift, calorimetry and luciferase assays and, in vivo via colocalization and chromatin immunoprecipitation. We found that Rbpj simultaneously represses Atoh7 transcription using both Notch-dependent and -independent pathways.

Indexed as

AnimalsBasic Helix-Loop-Helix ProteinsBinding SitesGene Expression RegulationImmunoglobulin J Recombination Signal Sequence-Binding ProteinMiceNerve Tissue ProteinsReceptors, NotchRegulatory Elements, TranscriptionalRetinaSignal TransductionTranscription, GeneticAtoh7 protein, mouseBasic Helix-Loop-Helix ProteinsImmunoglobulin J Recombination Signal Sequence-Binding ProteinNerve Tissue ProteinsRbpj protein, mouseReceptors, Notch

Identifiers

PMID29977079
PMCPMC6033939
OpenAlexW2809699911

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.