Evidence map›Paper›PMID 29973960›Full record

ArticleJournal of genomics2018

Expression and network analysis of YBX1 interactors for identification of new drug targets in lung adenocarcinoma.

Suriya Narayanan Murugesan, Birendra Singh Yadav, Pramod Kumar Maurya, Amit Chaudhary, Swati Singh, Ashutosh Mani

Open access · goldAbstract read
In one paragraph

Article in Journal of genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
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  5. RNA-binding proteins in diabetic microangiopathy.Journal of clinical laboratory analysis · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Suriya Narayanan MurugesanDepartment of Biotechnology, Motilal Nehru National Institute of Technology, Allahabad, India-211004.
Birendra Singh YadavDepartment of Biotechnology, Motilal Nehru National Institute of Technology, Allahabad, India-211004.
Pramod Kumar MauryaDepartment of Biotechnology, Motilal Nehru National Institute of Technology, Allahabad, India-211004.
Amit ChaudharyDepartment of Biotechnology, Motilal Nehru National Institute of Technology, Allahabad, India-211004.
Swati SinghCenter of Bioinformatics, University of Allahabad, India-211002.
Ashutosh ManiDepartment of Biotechnology, Motilal Nehru National Institute of Technology, Allahabad, India-211004.
Motilal Nehru National Institute of Technology · INUniversity of Allahabad · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Y-Box Binding protein 1 (YBX-1) is known to be involved in various types of cancers. It's interactors also play major role in various cellular functions. Present work aimed to study the expression profile of the YBX-1 interactors during lung adenocarcinoma (LUAD). The differential expression analysis involved 57 genes from 95 lung adenocarcinoma samples, construction of gene network and topology analysis. A Total of 43 genes were found to be differentially expressed from which 17 genes were found to be down regulated and 26 genes were up-regulated. We observed that Polyadenylate-binding protein 1 (PABPC1), a protein involved in YBX1 translation, is highly correlated with YBX1. The interaction network analysis for a differentially expressed non-coding RNA Growth Arrest Specific 5 (GAS5) suggests that two proteins namely, Growth Arrest Specific 2 (GAS2) and Peripheral myelin protein 22 (PMP22) are potentially involved in LUAD progression. The network analysis and differential expression suggests that Collagen type 1 alpha 2 (COL1A2) can be potential biomarker and target for LUAD.

Indexed as

lung adenocarcinomaregulatory networkRNA-Seq.YBX1

Identifiers

PMID29973960
PMCPMC6030768
OpenAlexW2843144820

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.