Evidence map›Paper›PMID 29973717›Full record

ArticleNature2018

CRISPR screens identify genomic ribonucleotides as a source of PARP-trapping lesions.

Michal Zimmermann, Olga Murina, Martin A M Reijns, Angelo Agathanggelou, Rachel Challis, Žygimantė Tarnauskaitė, Morwenna Muir, Adeline Fluteau, Michael Aregger, Andrea McEwan and 14 more

Open access · greenAbstract read
In one paragraph

Article in Nature, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 269 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
269citing papers in PubMed, 4 pooled it
17.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

269 citing papers in PubMed, 4 syntheses or guidelines pooled it, 408 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. RNASEH2B loss and PARP inhibition in advanced prostate cancer.The Journal of clinical investigation · 2024
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209 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 11 institutions in 3 countries.

Michal ZimmermannThe Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario, Canada.
Olga MurinaMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK.
Martin A M ReijnsMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK.
Angelo AgathanggelouInstitute for Cancer and Genomic Sciences, University of Birmingham, Birmingham, UK.
Rachel ChallisMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK.
Žygimantė TarnauskaitėMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK.
Morwenna MuirCancer Research UK Edinburgh Centre, University of Edinburgh, Edinburgh, UK.
Adeline FluteauMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK.
Michael AreggerDonnelly Centre, University of Toronto, Toronto, Ontario, Canada.
Andrea McEwanThe Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario, Canada.
Wei YuanThe Institute of Cancer Research, London, UK.
Matthew ClarkeThe Institute of Cancer Research, London, UK.
Maryou B LambrosThe Institute of Cancer Research, London, UK.
Shankara PaneeshaHeartlands Hospital, Birmingham, UK.
Paul MossInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham, UK.
Megha ChandrashekharDonnelly Centre, University of Toronto, Toronto, Ontario, Canada.
Stephane AngersDepartment of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy & Department of Biochemistry, Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada.
Jason MoffatDonnelly Centre, University of Toronto, Toronto, Ontario, Canada.
Valerie G BruntonCancer Research UK Edinburgh Centre, University of Edinburgh, Edinburgh, UK.
Traver HartDepartment of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Johann de BonoThe Institute of Cancer Research, London, UK.
Tatjana StankovicInstitute for Cancer and Genomic Sciences, University of Birmingham, Birmingham, UK.
Andrew P JacksonMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK. andrew.jackson@igmm.ed.ac.uk.
Daniel DurocherThe Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario, Canada. durocher@lunenfeld.ca.
University of Toronto · CAInstitute of Cancer Research · GBInstitute of Genetics and Cancer · GBUniversity of Birmingham · GBUniversity of Edinburgh · GBEdinburgh Cancer Research · GBMount Sinai Hospital · CACanadian Institute for Advanced Research · CAHeartlands Hospital · GBRoyal Marsden NHS Foundation Trust · GBThe University of Texas MD Anderson Cancer Center · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Medical Research Council MC_PC_U127580972Medical Research Council MC_UU_00007/5NCI NIH HHS P30 CA016672
6 · The paper itself

Abstract

The observation that BRCA1- and BRCA2-deficient cells are sensitive to inhibitors of poly(ADP-ribose) polymerase (PARP) has spurred the development of cancer therapies that use these inhibitors to target deficiencies in homologous recombination

Indexed as

CRISPR-Cas SystemsDNA DamageGene EditingAnimalsBRCA1 ProteinCell LineDNA RepairDNA ReplicationDNA Topoisomerases, Type IFemaleGenes, BRCA1GenomeHeLa CellsHumansLeukemia, Lymphocytic, Chronic, B-CellMaleBRCA1 ProteinDNA Topoisomerases, Type IolaparibPARP1 protein, humanPhthalazinesPiperazinesPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerase InhibitorsRibonuclease Hribonuclease HIIRibonucleotidestalazoparibTOP1 protein, human

Identifiers

PMID29973717
PMCPMC6071917
OpenAlexW2810583998

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.