Evidence map›Paper›PMID 29973623›Full record

ArticleScientific reports2018

MicroRNA interactome analysis predicts post-transcriptional regulation of ADRB2 and PPP3R1 in the hypercholesterolemic myocardium.

Bence Ágg, Tamás Baranyai, András Makkos, Borbála Vető, Nóra Faragó, Ágnes Zvara, Zoltán Giricz, Dániel V Veres, Péter Csermely, Tamás Arányi and 3 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Guideline
  2. Review
  3. Article
  4. Beneath the surface: endosomal GPCR signaling.Trends in biochemical sciences · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Molecular Network Approach RevealsInternational journal of molecular sciences · 2021
    Article
  11. Article
  12. The Role of microRNAs in Metabolic Syndrome-Related Oxidative Stress.International journal of molecular sciences · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Tethering soluble meprin α in an enzyme complex to the cell surface affects IBD-associated genes.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  18. Article
  19. Article
  20. Sensory Neuropathy Affects Cardiac miRNA Expression Network TargetingInternational journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Bence ÁggDepartment of Pharmacology and Pharmacotherapy, Semmelweis University, 1089, Budapest, Hungary.ORCID 0000-0002-6492-0426
Tamás BaranyaiDepartment of Pharmacology and Pharmacotherapy, Semmelweis University, 1089, Budapest, Hungary.
András MakkosDepartment of Pharmacology and Pharmacotherapy, Semmelweis University, 1089, Budapest, Hungary.
Borbála VetőInstitute of Enzymology, Research Center for Natural Sciences, Hungarian Academy of Sciences, 1117, Budapest, Hungary.
Nóra FaragóInstitute of Genetics, Biological Research Center of the Hungarian Academy of Sciences, 6726, Szeged, Hungary.
Ágnes ZvaraInstitute of Genetics, Biological Research Center of the Hungarian Academy of Sciences, 6726, Szeged, Hungary.
Zoltán GiriczDepartment of Pharmacology and Pharmacotherapy, Semmelweis University, 1089, Budapest, Hungary.ORCID 0000-0003-2036-8665
Dániel V VeresDepartment of Medical Chemistry, Semmelweis University, 1094, Budapest, Hungary.
Péter CsermelyDepartment of Medical Chemistry, Semmelweis University, 1094, Budapest, Hungary.ORCID 0000-0001-9234-0659
Tamás ArányiInstitute of Enzymology, Research Center for Natural Sciences, Hungarian Academy of Sciences, 1117, Budapest, Hungary.
László G PuskásInstitute of Genetics, Biological Research Center of the Hungarian Academy of Sciences, 6726, Szeged, Hungary.
Zoltán V VargaDepartment of Pharmacology and Pharmacotherapy, Semmelweis University, 1089, Budapest, Hungary.
Péter FerdinandyDepartment of Pharmacology and Pharmacotherapy, Semmelweis University, 1089, Budapest, Hungary. peter.ferdinandy@pharmahungary.com.ORCID 0000-0002-6424-6806
Semmelweis University · HUInstitute of Genetics · HUInstitute of Molecular Life Sciences · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Little is known about the molecular mechanism including microRNAs (miRNA) in hypercholesterolemia-induced cardiac dysfunction. We aimed to explore novel hypercholesterolemia-induced pathway alterations in the heart by an unbiased approach based on miRNA omics, target prediction and validation. With miRNA microarray we identified forty-seven upregulated and ten downregulated miRNAs in hypercholesterolemic rat hearts compared to the normocholesterolemic group. Eleven mRNAs with at least 4 interacting upregulated miRNAs were selected by a network theoretical approach, out of which 3 mRNAs (beta-2 adrenergic receptor [Adrb2], calcineurin B type 1 [Ppp3r1] and calcium/calmodulin-dependent serine protein kinase [Cask]) were validated with qRT-PCR and Western blot. In hypercholesterolemic hearts, the expression of Adrb2 mRNA was significantly decreased. ADRB2 and PPP3R1 protein were significantly downregulated in hypercholesterolemic hearts. The direct interaction of Adrb2 with upregulated miRNAs was demonstrated by luciferase reporter assay. Gene ontology analysis revealed that the majority of the predicted mRNA changes may contribute to the hypercholesterolemia-induced cardiac dysfunction. In summary, the present unbiased target prediction approach based on global cardiac miRNA expression profiling revealed for the first time in the literature that both the mRNA and protein product of Adrb2 and PPP3R1 protein are decreased in the hypercholesterolemic heart.

Indexed as

AnimalsCalcineurinDown-RegulationGuanylate KinasesHeLa CellsHumansHypercholesterolemiaMicroRNAsMyocardiumRatsRats, WistarReceptors, Adrenergic, beta-2RNA, MessengerRNA Processing, Post-TranscriptionalCalcineurinCASK kinasesGuanylate KinasesMicroRNAsppp3r1 protein, ratReceptors, Adrenergic, beta-2RNA, Messenger

Identifiers

PMID29973623
PMCPMC6031673
OpenAlexW2811402024

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.