Evidence map›Paper›PMID 29973587›Full record

ArticleExperimental & molecular medicine2018

Assessment of genetic factor and depression interactions for asthma symptom severity in cohorts of childhood and elderly asthmatics.

Heung-Woo Park, Woo-Jung Song, Sang-Heon Cho, Michael J McGeachie, Fernando Martinez, Dave Mauger, Bruce G Bender, Kelan G Tantisira

Open access · goldAbstract read
In one paragraph

Article in Experimental & molecular medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Paediatric asthma and non-allergic comorbidities: A review of current risk and proposed mechanisms.Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology · 2022
    Review
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 4 countries.

Heung-Woo ParkDepartment of Medicine, Channing Division of Network of Medicine, Brigham and Womens Hospital, Harvard Medical School, Boston, MA, USA. guinea71@snu.ac.kr.ORCID http://orcid.org/0000-0002-6970-3228
Woo-Jung SongDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Sang-Heon ChoDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Michael J McGeachieDepartment of Medicine, Channing Division of Network of Medicine, Brigham and Womens Hospital, Harvard Medical School, Boston, MA, USA.
Fernando MartinezArizona Respiratory Center, University of Arizona, Tucson, AZ, USA.
Dave MaugerDepartment of Public Health Sciences, Pennsylvania State University College of Medicine, Hershey, PA, USA.
Bruce G BenderNational Jewish Health, Denver, CO, USA.
Kelan G TantisiraDepartment of Medicine, Channing Division of Network of Medicine, Brigham and Womens Hospital, Harvard Medical School, Boston, MA, USA.
Brigham and Women's Hospital · USSeoul National University · KRNational Jewish Health · USPennsylvania State University · USUniversity of Arizona · US

Funding

THE PHARMACOGENETICS OF ASTHMA TREATMENTU01HL065899 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI TANTISIRA, KELAN G, WEISS, SCOTT T · 2000 to 2014
$38.5M
SOUTHWEST ENVIRONMENTAL HEALTH SCIENCES CENTERP30ES006694 · NIEHS · UNIVERSITY OF ARIZONA · PI DEAN BILLHEIMER · 1994 to 2026
$36.7M
PEDIATRIC ASTHMA NETWORK DATA COORDINATING CENTERU10HL064313 · NHLBI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI MAUGER, DAVID T. · 1999 to 2008
$18.3M
Asthma Exacerbations and MicroRNA prediction: Treatment Response in an Underserved Ethnicity (AEM-TRUE)R01HL139634 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI MCGEACHIE, MICHAEL JOHN · 2018 to 2022
$4.3M
MICRORNAS IN CIRCULATION: ONTOLOGIES OF ASTHMA SEVERITY AND TREATMENT (MICROCOAST)R01HL127332 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI TANTISIRA, KELAN G · 2015 to 2018
$3.4M
GENOMICS AND PHARMACOGENOMICS OF SYMPTOMS IN ASTHMAR01NR013391 · NINR · BRIGHAM AND WOMEN'S HOSPITAL · PI TANTISIRA, KELAN G · 2011 to 2013
$1.3M
NHLBI NIH HHS R01 HL127332NHLBI NIH HHS R01 HL139634NHLBI NIH HHS U01 HL065899NHLBI NIH HHS U10 HL064313NIEHS NIH HHS P30 ES006694NIH HHS R01 NR013391 and U01 HL065899NINR NIH HHS R01 NR013391
6 · The paper itself

Abstract

It is well known that depression is associated with asthma symptoms. We assessed the combined effects of genetic factors and depression on asthma symptom severity using Bayesian network (BN) analysis. The common 100 top-ranked single-nucleotide polymorphisms (SNPs) were obtained from two genome-wide association studies of symptom severity in two childhood asthmatics trials (CAMP (Childhood Asthma Management Program) and CARE (Childhood Asthma Research and Education)). Using SNPs plus five discretized variables (depression, anxiety, age, sex, and race), we performed BN analysis in 529 CAMP subjects. We identified two nodes (depression and rs4672619 mapping to ERBB4 (Erb-B2 receptor tyrosine kinase 4)) that were within the Markov neighborhood of the symptom node in the network and then evaluated the interactive effects of depressive status and rs4672619 genotypes on asthma symptom severity. In childhood asthmatics with homozygous reference alleles, severe depression was related to less severe symptoms. However, in childhood asthmatics with heterozygous alleles and homozygous variant alleles, depression and symptom severity showed a positive correlation (interaction permutation P value = 0.019). We then tried to evaluate whether the interactive effects that we found were sustained in another independent cohort of elderly asthmatics. Contrary to the findings from childhood asthmatics, elderly asthmatics with homozygous reference alleles showed a positive correlation between depression and symptom severity, and elderly asthmatics with heterozygous alleles and homozygous variant alleles showed a negative correlation (interaction permutation P value = 0.003). In conclusion, we have identified a novel SNP, rs4672619, that shows interactive effects with depression on asthma symptom severity in childhood and elderly asthmatics in opposite directions.

Indexed as

Polymorphism, Single NucleotideAgedAsthmaChildDepressionFemaleHomozygoteHumansMaleReceptor, ErbB-4ERBB4 protein, humanReceptor, ErbB-4

Identifiers

PMID29973587
PMCPMC6031659
OpenAlexW2811150396

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.